Gene omics information

Query gene ID	Ta.30520.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.30520.1.S1_at	CA635767	-	-	8e-20	At1g55360	unknown protein	S.X.	H.G.	Please select
0.05	6.7	Ta.14346.1.A1_at	BQ236769	-	-	4e+0	At1g76180	ERD14 (EARLY RESPONSE TO DEHYDRATION 14)	S.X.	H.G.	Please select
0.02	3.6	Ta.3285.1.S1_at	BQ905252	-	-	2e-10	At3g55000	TON1A (TONNEAU 1)	S.X.	H.G.	Please select
0.02	3.6	TaAffx.132784.1.A1_at	BQ235909	-	-	1e+0	At5g38720	unknown protein	S.X.	H.G.	Please select
0.01	2.4	Ta.3168.1.S1_at	CD868850	-	-	4e-5	At2g25670	unknown protein	S.X.	H.G.	Please select
0.01	2.4	Ta.9231.2.S1_x_at	BE419141	-	-	2e-8	At2g19750	40S ribosomal protein S30 (RPS30A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.1	99.3	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.0	99.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
9.7	99.1	GSM138177	genotype A40 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.7	98.4	GSM138179	genotype A88 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.4	98.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.9	98.0	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.1	97.5	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.1	97.5	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0	97.4	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0	97.4	GSM138189	genotype F38a developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.36	1e-120	434	Ta.7595.1.A1_at	BJ261301	-	-	5e-4	At3g13510	unknown protein	C.G.	S.X.	Please select
0.29	1e-49	198	Ta.5845.1.S1_x_at	CK153266	-	-	3e-13	At3g13510	unknown protein	C.G.	S.X.	Please select
0.29	1e-49	198	Ta.5845.1.S1_at	CK153266	-	-	3e-13	At3g13510	unknown protein	C.G.	S.X.	Please select
0.10	4e-37	157	Ta.5845.2.A1_x_at	CK208140	-	-	5e+0	Atmg01220	-	C.G.	S.X.	Please select
0.10	4e-37	157	Ta.5845.2.A1_at	CK208140	-	-	5e+0	Atmg01220	-	C.G.	S.X.	Please select
0.06	3e-13	77	TaAffx.93289.1.S1_at	BJ224797	-	-	7e-2	At5g18460	unknown protein	C.G.	S.X.	Please select
0.08	5e-9	63	TaAffx.54050.1.S1_at	CA686390	-	-	2e-1	At1g10750	unknown protein	C.G.	S.X.	Please select
0.04	2e-8	61	TaAffx.113652.1.S1_at	CA607485	-	-	1e+0	At5g56530	unknown protein	C.G.	S.X.	Please select
0.02	2e-2	42	Ta.8715.2.S1_x_at	CA664348	-	-	1e+0	At5g14240	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	8e-20	99	Arabidopsis thaliana	At1g55360	841982	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.15	1e-19	99	Glycine max	Gma.2172.2.S1_a_at	BI426425	-	-	1e-145	At1g55360	unknown protein	C.G.	S.X.	Please select
0.28	9e-86	317	Hordeum vulgare	Contig5272_s_at	Contig5272	-	-	4e-1	At3g13510	unknown protein	C.G.	S.X.	Please select
0.41	0	854	Oryza sativa	Os07g0573400	AK121705.1	-	Protein of unknown function DUF239 domaincontaining protein	8e-42	At3g13510	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	8e-21	103	Populus trichocarpa	Ptp.6391.1.S1_s_at	CA934886	hypothetical protein	-	3e-65	At1g55360	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	2e-39	163	Vitis vinifera	1620804_at	CD797824	hypothetical protein LOC100267227	-	3e-114	At1g55360	unknown protein	C.G.	S.X.	Please select
0.43	7e-151	533	Zea mays	Zm.10376.1.S1_at	BQ538350	-	-	2e-11	At3g13510	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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