Gene omics information

Query gene ID	Ta.30507.1.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.30507.1.S1_a_at	CK214499	-	-	2e+0	At5g35230	unknown protein	S.X.	H.G.	Please select
0.68	86.5	Ta.13803.1.S1_x_at	CA498188	-	-	3e-2	At1g73630	calcium-binding protein, putative	S.X.	H.G.	Please select
0.65	83.9	TaAffx.98004.1.S1_at	BQ801268	-	-	1e+0	At5g28610	-	S.X.	H.G.	Please select
0.64	83.6	Ta.7991.3.S1_at	CA705300	-	-	8e-1	At3g17980	C2 domain-containing protein	S.X.	H.G.	Please select
0.64	83.6	Ta.29444.2.S1_a_at	CA684925	-	-	4e-2	At3g55050	serine/threonine protein phosphatase 2C (PP2C6)	S.X.	H.G.	Please select
0.63	83.1	Ta.13803.3.S1_x_at	AL830288	-	-	2e+0	At2g29920	unknown protein	S.X.	H.G.	Please select
0.63	83.1	TaAffx.17013.2.S1_x_at	CA730181	-	-	1e+0	At4g10250	ATHSP22.0	S.X.	H.G.	Please select
0.62	82.3	Ta.24601.1.S1_at	BQ483742	-	-	1e+0	At1g49400	emb1129 (embryo defective 1129)	S.X.	H.G.	Please select
0.59	79.8	Ta.4736.1.A1_at	BJ275856	-	-	6e+0	At1g54230	DNA binding	S.X.	H.G.	Please select
0.59	79.8	Ta.7568.1.S1_x_at	BJ276089	-	-	4e-1	At5g37780	CAM1 (CALMODULIN 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.7	99.7	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
15.6	99.6	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
15.2	99.6	GSM138145	Genotype RL4452 developing seed at 5 days after anthesis, biological rep3 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
13.3	99.5	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.9	99.1	GSM138215	genotype A77 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.8	99.1	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.9	99.0	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.3	98.8	GSM143523	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.9	98.7	GSM138200	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.5	98.6	GSM143524	Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.89	0	1051	Ta.30507.1.S1_x_at	CK214499	-	-	2e+0	At5g35230	unknown protein	C.G.	S.X.	Please select
0.89	0	1051	Ta.30507.1.S1_at	CK214499	-	-	2e+0	At5g35230	unknown protein	C.G.	S.X.	Please select
0.18	1e-75	284	Ta.30507.2.S1_x_at	BJ321266	-	-	4e+0	At4g03600	unknown protein	C.G.	S.X.	Please select
0.08	2e-31	137	Ta.2429.3.S1_x_at	CA629200	-	-	5e+0	At1g27530	-	C.G.	S.X.	Please select
0.05	4e-17	89	Ta.28472.1.S1_at	BE429461	-	-	7e+0	At2g27340	-	C.G.	S.X.	Please select
0.05	7e-16	85	Ta.7378.36.S1_x_at	BJ305501	-	-	9e-30	At1g07790	HTB1	C.G.	S.X.	Please select
0.05	7e-16	85	Ta.7378.36.S1_at	BJ305501	-	-	9e-30	At1g07790	HTB1	C.G.	S.X.	Please select
0.06	3e-15	83	TaAffx.115378.1.S1_at	CK217862	-	-	5e-9	At5g54160	ATOMT1 (O-METHYLTRANSFERASE 1)	C.G.	S.X.	Please select
0.04	3e-15	83	Ta.9798.1.S1_at	AY123416.1	-	-	1e-26	At1g22450	COX6B (CYTOCHROME C OXIDASE 6B)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	34	Arabidopsis thaliana	At5g35230	833477	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-2	40	Glycine max	HgAffx.6186.1.S1_at	CB826026	-	-	3e-1	At2g01080	-	C.G.	S.X.	Please select
0.61	2e-103	375	Hordeum vulgare	Contig11225_at	Contig11225	-	-	7e+0	At5g13220	JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)	C.G.	S.X.	Please select
0.18	5e-21	103	Oryza sativa	Os03g0181100	AK120087.1	-	ZIM domain containing protein	2e+0	At3g59370	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	5e-2	40	Populus trichocarpa	Ptp.3942.3.S1_at	CV249512	-	-	3e-1	At5g56140	KH domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	6e-1	34	Vitis vinifera	1622486_at	CF510820	hypothetical protein LOC100247768	-	3e-13	At4g13520	SMAP1 (SMALL ACIDIC PROTEIN 1)	C.G.	S.X.	Please select
0.18	5e-27	121	Zea mays	Zm.10850.1.S1_at	AY106263.1	ZIM motif family protein	-	8e-1	At5g40420	OLEO2 (OLEOSIN 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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