Gene omics information

Query gene ID	Ta.303.3.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.303.3.S1_x_at	AJ610447	-	-	2e+0	At2g30860	ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)	S.X.	H.G.	Please select
0.83	93.4	Ta.303.3.S1_at	AJ610447	-	-	2e+0	At2g30860	ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)	S.X.	H.G.	Please select
0.80	92.2	Ta.22415.1.S1_x_at	CA743955	-	-	7e+0	At5g24314	PTAC7	S.X.	H.G.	Please select
0.61	82.0	TaAffx.54157.2.S1_at	CA663807	-	-	6e-3	At1g74550	CYP98A9	S.X.	H.G.	Please select
0.56	78.6	Ta.303.1.S1_x_at	BG906281	-	-	3e+0	At3g28590	unknown protein	S.X.	H.G.	Please select
0.35	49.8	Ta.303.2.S1_x_at	CA668994	-	-	3e+0	At2g30860	ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
43.4	99.9	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
36.2	99.9	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
32.0	99.9	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
29.9	99.8	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
28.6	99.8	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
23.3	99.8	GSM298080	Leaf tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
21.2	99.7	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
16.7	99.6	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
9.0	99.0	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
8.8	98.9	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.90	0	1007	Ta.303.3.S1_at	AJ610447	-	-	2e+0	At2g30860	ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)	C.G.	S.X.	Please select
0.71	9e-179	626	Ta.303.2.S1_at	CA668994	-	-	3e+0	At2g30860	ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)	C.G.	S.X.	Please select
0.71	9e-179	626	Ta.303.2.S1_x_at	CA668994	-	-	3e+0	At2g30860	ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)	C.G.	S.X.	Please select
0.46	2e-139	496	TaAffx.109595.1.S1_at	CA688712	-	-	1e+1	At1g62333	unknown protein	C.G.	S.X.	Please select
0.30	1e-97	357	TaAffx.109595.2.S1_at	CA678391	-	-	3e+0	At1g79870	oxidoreductase family protein	C.G.	S.X.	Please select
0.36	3e-46	186	Ta.303.1.S1_at	BG906281	-	-	3e+0	At3g28590	unknown protein	C.G.	S.X.	Please select
0.36	3e-46	186	Ta.303.1.S1_x_at	BG906281	-	-	3e+0	At3g28590	unknown protein	C.G.	S.X.	Please select
0.09	1e-14	81	TaAffx.81271.1.S1_at	CA687929	-	-	2e+1	At1g14950	major latex protein-related / MLP-related	C.G.	S.X.	Please select
0.19	4e-14	79	Ta.23704.1.S1_x_at	AJ440795.1	Glutathione transferase	-	3e+0	At2g16575	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	Arabidopsis thaliana	At2g30860	817636	ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)	Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	2e-1	38	Glycine max	GmaAffx.47629.1.S1_at	CA937714	-	-	2e-67	At1g79940	ATERDJ2A	C.G.	S.X.	Please select
0.51	2e-97	355	Hordeum vulgare	Contig2976_at	Contig2976	-	-	3e+0	At2g30860	ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)	C.G.	S.X.	Please select
0.30	3e-19	97	Oryza sativa	Os01g0370200	9629.m02604	-	Glutathione-S-transferase 19E50	3e-1	At1g68552	CPuORF53 (Conserved peptide upstream open reading frame 53)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	3e+0	34	Populus trichocarpa	PtpAffx.203843.1.S1_at	pmrna7586	hypothetical protein	-	7e+0	At5g55110	stigma-specific Stig1 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e-2	38	Vitis vinifera	1616933_at	CB345010	hypothetical protein LOC100265903	-	1e-13	At1g02920	GSTF7	C.G.	S.X.	Please select
0.08	2e-5	50	Zea mays	Zm.9.1.A1_a_at	M16901.1	glutathione-S-transferase1	-	6e-4	At4g02520	ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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