Gene omics information

Query gene ID	Ta.30113.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.30113.1.S1_at	CA629859	-	-	2e-5	At1g56600	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	S.X.	H.G.	Please select
0.91	98.2	TaAffx.53823.1.S1_at	CA688763	-	-	4e-3	At5g20680	unknown protein	S.X.	H.G.	Please select
0.83	93.4	Ta.13008.1.S1_at	CK210275	galactinol synthase	-	6e-14	At1g09350	AtGolS3 (Arabidopsis thaliana galactinol synthase 3)	S.X.	H.G.	Please select
0.73	89.1	TaAffx.101246.1.S1_x_at	CD924062	-	-	3e-1	At4g22100	BGLU3 (BETA GLUCOSIDASE 2)	S.X.	H.G.	Please select
0.73	89.1	TaAffx.101246.1.S1_at	CD924062	-	-	3e-1	At4g22100	BGLU3 (BETA GLUCOSIDASE 2)	S.X.	H.G.	Please select
0.60	81.0	Ta.22764.1.S1_x_at	CA693081	-	-	4e+0	At3g24070	zinc knuckle (CCHC-type) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
51.2	99.9	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
48.9	99.9	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
43.6	99.9	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
37.4	99.9	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
13.8	99.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
11.2	99.3	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.8	98.9	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.9	98.4	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.2	98.1	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.1	98.1	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	9e-82	303	Ta.13008.1.S1_at	CK210275	galactinol synthase	-	6e-14	At1g09350	AtGolS3 (Arabidopsis thaliana galactinol synthase 3)	C.G.	S.X.	Please select
0.10	6e-6	52	TaAffx.17365.2.A1_at	BJ296973	-	-	2e-14	At1g60470	AtGolS4 (Arabidopsis thaliana galactinol synthase 4)	C.G.	S.X.	Please select
0.04	2e-5	50	TaAffx.17365.1.S1_at	CK206695	-	-	1e-14	At1g56600	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	C.G.	S.X.	Please select
0.02	2e-5	50	Ta.1632.1.S1_s_at	CK196174	-	-	8e-14	At1g19880	regulator of chromosome condensation (RCC1) family protein	C.G.	S.X.	Please select
0.02	9e-2	38	Ta.7484.1.A1_at	AY587885.1	ubiquitin fusion degradation protein	-	5e-27	At2g21270	ubiquitin fusion degradation UFD1 family protein	C.G.	S.X.	Please select
0.04	9e-2	38	Ta.14931.1.S1_at	CA684978	-	-	4e-1	At1g02305	cathepsin B-like cysteine protease, putative	C.G.	S.X.	Please select
0.02	9e-2	38	Ta.10471.1.S1_x_at	BJ297605	-	-	2e-16	At3g17820	ATGSKB6	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.37400.1.S1_at	BJ281401	-	-	3e-1	At1g18980	germin-like protein, putative	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.24129.1.S1_at	CA724694	-	-	8e-1	At1g16300	GAPCP-2	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e-5	50	Arabidopsis thaliana	At1g56600	842114	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	7e+0	32	Glycine max	GmaAffx.1316.1.A1_at	BI969798	-	-	3e+0	At5g56230	PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2)	C.G.	S.X.	Please select
0.26	4e-30	131	Hordeum vulgare	Contig3810_s_at	Contig3810	-	-	3e-18	At1g09350	AtGolS3 (Arabidopsis thaliana galactinol synthase 3)	C.G.	S.X.	Please select
0.04	7e-4	46	Oryza sativa	Os07g0687900	D26537.1	-	WSI76 protein induced by water stress	4e-24	At1g09350	AtGolS3 (Arabidopsis thaliana galactinol synthase 3)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	1e-7	57	Populus trichocarpa	PtpAffx.3724.2.A1_at	BP935990	hypothetical protein	-	2e-34	At1g56600	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+1	28	Vitis vinifera	1613202_s_at	CF514461	similar to SLY1 (SLEEPY1)	-	9e+0	At5g44560	VPS2.2	C.G.	S.X.	Please select
0.05	6e-4	44	Zea mays	Zm.12202.1.A1_at	BG549493	Galactinol synthase 1	-	3e-5	At1g09350	AtGolS3 (Arabidopsis thaliana galactinol synthase 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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