Gene omics information

Query gene ID	Ta.29445.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.70	87.2	Ta.29445.1.S1_at	CK212497	-	-	3e+0	At3g48660	unknown protein	S.X.	H.G.	Please select
0.90	94.8	Ta.21020.1.S1_at	CD895774	-	-	3e+0	At3g57710	protein kinase family protein	S.X.	H.G.	Please select
0.89	94.6	Ta.11619.1.A1_at	CN011986	-	-	2e+1	At3g28958	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.84	93.6	Ta.5103.1.S1_at	BJ271759	-	-	1e-3	At4g38680	GRP2 (GLYCINE RICH PROTEIN 2)	S.X.	H.G.	Please select
0.84	93.6	Ta.27766.2.S1_at	CD896218	fasciclin-like protein FLA6	-	1e+1	At3g21150	zinc finger (B-box type) family protein	S.X.	H.G.	Please select
0.84	93.6	Ta.8258.3.S1_at	CN012816	-	-	1e+0	At3g63095	-	S.X.	H.G.	Please select
0.84	93.6	Ta.10042.1.S1_at	CK205237	-	-	2e-4	At4g28780	GDSL-motif lipase/hydrolase family protein	S.X.	H.G.	Please select
0.80	92.2	Ta.8258.2.S1_at	BJ233335	-	-	1e+0	At3g63095	-	S.X.	H.G.	Please select
0.76	90.1	Ta.10068.1.S1_at	AL830062	-	-	8e-2	At3g07510	unknown protein	S.X.	H.G.	Please select
0.70	87.2	Ta.22816.1.S1_x_at	CD885331	type 2 non-specific lipid transfer protein precursor	-	4e+0	At1g24510	T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.6	95.6	GSM111218	genotype F29 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6	95.6	GSM111224	genotype A81 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.5	95.4	GSM111213	genotype DH91 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.5	95.4	GSM138171	genotype C31 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.5	95.4	GSM111242	genotype C10 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4	95.2	GSM111212	genotype DH91 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4	95.2	GSM111186	genotype B68 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4	95.2	GSM111238	genotype A91 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.3	95.0	GSM111192	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.3	95.0	GSM138175	genotype A81 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.64	0	1243	Ta.20658.2.S1_x_at	BJ285838	-	-	9e-3	At2g18020	EMB2296 (embryo defective 2296)	C.G.	S.X.	Please select
0.38	3e-127	456	Ta.20658.3.S1_x_at	BJ294354	-	-	1e+0	At5g40690	-	C.G.	S.X.	Please select
0.41	1e-92	341	Ta.20658.1.S1_a_at	BQ236450	-	-	4e-1	At3g06130	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.41	1e-92	341	Ta.20658.1.S1_x_at	BQ236450	-	-	4e-1	At3g06130	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.16	2e-26	121	Ta.21022.1.S1_at	CA641912	-	-	2e-1	At3g62280	carboxylesterase/ hydrolase, acting on ester bonds	C.G.	S.X.	Please select
0.11	7e-23	109	Ta.5520.1.S1_at	BJ238996	-	-	1e+1	At5g43250	NF-YC13 (NUCLEAR FACTOR Y, SUBUNIT C13)	C.G.	S.X.	Please select
0.17	2e-20	101	Ta.10275.1.S1_at	BQ170676	-	-	3e+0	At5g64400	-	C.G.	S.X.	Please select
0.11	4e-18	93	Ta.3310.1.S1_at	CA732334	-	-	8e-1	At1g28590	lipase, putative	C.G.	S.X.	Please select
0.04	2e-14	81	TaAffx.117521.1.S1_at	BQ743382	-	-	2e-1	At1g28640	GDSL-motif lipase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e+0	34	Arabidopsis thaliana	At3g48660	824026	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e-1	38	Glycine max	PsAffx.C47000018_at	PsAffx.C47000018	-	-	1e+0	At5g07510	GRP14	C.G.	S.X.	Please select
0.79	0	1750	Hordeum vulgare	Contig8549_at	Contig8549	-	-	2e-1	At5g10510	AIL6 (AINTEGUMENTA-LIKE 6)	C.G.	S.X.	Please select
0.55	0	979	Oryza sativa	Os06g0531900	AK067909.1	-	Lipolytic enzyme, G-D-S-L family protein	8e-1	At3g16100	ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	3e-4	48	Populus trichocarpa	PtpAffx.218298.1.S1_at	pmrna33861	hypothetical protein	-	7e+0	At1g55770	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	6e-2	38	Vitis vinifera	1611765_at	BQ799728	hypothetical protein LOC100248412	-	2e+0	At5g19230	unknown protein	C.G.	S.X.	Please select
0.26	1e-99	363	Zea mays	Zm.6638.1.A1_at	AI619165	esterase	-	4e-1	At3g16100	ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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