Gene omics information

Query gene ID	Ta.29331.2.S1_x_at
Gene name	FD-like 6 protein
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.29331.2.S1_x_at	CA611511	FD-like 6 protein	-	1e+1	At5g06280	unknown protein	S.X.	H.G.	Please select
0.60	81.0	Ta.3909.1.A1_x_at	BJ274929	-	-	8e-1	At3g01400	armadillo/beta-catenin repeat family protein	S.X.	H.G.	Please select
0.40	58.4	Ta.7944.1.S1_at	CD877130	-	-	3e-3	At4g37880	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.23	29.0	Ta.29331.1.S1_a_at	CK168067	FD-like 6 protein	-	3e-16	At2g41070	EEL (ENHANCED EM LEVEL)	S.X.	H.G.	Please select
0.22	27.1	Ta.12707.1.A1_a_at	CD491136	-	-	5e+0	At4g20870	FAH2 (FATTY ACID HYDROXYLASE 2)	S.X.	H.G.	Please select
0.10	11.3	Ta.3001.1.S1_at	CK211723	-	-	4e-21	At5g56140	KH domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.5	98.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.4	98.2	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0	96.3	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
3.8	96.0	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM246397	SB57_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
3.4	95.2	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.26	2e-72	272	Ta.29331.1.S1_at	CK168067	FD-like 6 protein	-	3e-16	At2g41070	EEL (ENHANCED EM LEVEL)	C.G.	S.X.	Please select
0.26	2e-72	272	Ta.29331.1.S1_a_at	CK168067	FD-like 6 protein	-	3e-16	At2g41070	EEL (ENHANCED EM LEVEL)	C.G.	S.X.	Please select
0.04	4e+0	32	TaAffx.31877.1.S1_at	CA606056	-	-	3e+0	At5g09995	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.128510.12.S1_at	CA641382	-	-	3e-4	At4g17670	senescence-associated protein-related	C.G.	S.X.	Please select
0.04	4e+0	32	TaAffx.109982.1.S1_at	CA665803	-	-	4e+0	At3g48140	senescence-associated protein, putative	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.9562.1.S1_a_at	AJ613140	-	-	1e-2	At4g01810	protein transport protein-related	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.9111.2.A1_at	BJ309340	-	-	1e+0	At4g32660	AME3	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.3059.1.S1_at	CA605228	-	-	3e-1	At2g27250	CLV3 (CLAVATA3)	C.G.	S.X.	Please select
0.03	1e+1	30	TaAffx.83618.1.S1_at	CA655414	-	-	1e+0	At1g23480	ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+1	30	Arabidopsis thaliana	At5g06280	830516	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e+0	32	Glycine max	GmaAffx.47108.1.S1_at	BF010253	-	-	2e+0	At2g11270	citrate synthase-related	C.G.	S.X.	Please select
0.54	4e-38	157	Hordeum vulgare	HY04C04u_at	HY04C04u	-	-	7e-1	At1g09490	cinnamyl-alcohol dehydrogenase family / CAD family	C.G.	S.X.	Please select
0.02	2e+0	34	Oryza sativa	Os10g0547900	9638.m03624	-	Short-chain dehydrogenase Tic32	2e-3	At5g02540	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	5e+0	32	Populus trichocarpa	PtpAffx.220777.1.S1_s_at	pmrna37206	hypothetical protein	-	2e+0	At5g55970	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	30	Vitis vinifera	1622271_at	BM437605	-	-	1e-7	At5g11090	serine-rich protein-related	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	ZmAffx.556.1.A1_at	AI714513	-	-	1e+1	At4g23900	nucleoside diphosphate kinase 4 (NDK4)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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