Gene omics information

Query gene ID	Ta.2933.2.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.62	82.3	Ta.2933.2.S1_x_at	BQ162297	-	-	7e+0	At4g04953	unknown protein	S.X.	H.G.	Please select
0.61	82.0	Ta.8965.2.S1_x_at	BQ162698	-	-	1e-1	At3g53850	-	S.X.	H.G.	Please select
0.60	81.0	Ta.9391.2.S1_a_at	CA596737	-	-	1e+0	At1g17130	cell cycle control protein-related	S.X.	H.G.	Please select
0.54	75.5	Ta.4052.2.A1_a_at	BJ213636	-	-	1e+0	At1g57610	unknown protein	S.X.	H.G.	Please select
0.53	74.9	Ta.4052.1.A1_a_at	BJ263212	-	-	2e+0	At1g57610	unknown protein	S.X.	H.G.	Please select
0.52	73.7	Ta.25904.1.S1_at	CD454243	-	-	9e-5	At1g22800	methyltransferase	S.X.	H.G.	Please select
0.48	69.0	Ta.4828.1.S1_a_at	BJ272492	-	-	2e-1	At5g66190	FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)	S.X.	H.G.	Please select
0.46	66.8	Ta.11906.1.S1_at	BQ171036	-	-	4e+0	At5g21274	CAM6 (CALMODULIN 6)	S.X.	H.G.	Please select
0.45	65.2	Ta.484.1.S1_at	BJ322416	-	-	3e+0	At5g54150	unknown protein	S.X.	H.G.	Please select
0.44	64.5	Ta.8872.1.S1_at	BQ162544	-	-	5e+0	At3g14760	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.0	99.4	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
10.9	99.3	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
9.1	99.0	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.7	98.7	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
7.1	98.5	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.7	98.4	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.6	98.3	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.9	98.0	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.3	97.6	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.7	97.1	GSM324484	Si- B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.96	0	1598	Ta.2933.2.S1_a_at	BQ162297	-	-	7e+0	At4g04953	unknown protein	C.G.	S.X.	Please select
0.39	2e-71	270	Ta.16707.1.S1_at	CA611296	-	-	2e+0	At4g04953	unknown protein	C.G.	S.X.	Please select
0.05	2e-3	44	Ta.20489.1.S1_at	CA643887	-	-	2e+0	At1g75717	unknown protein	C.G.	S.X.	Please select
0.03	3e-2	40	TaAffx.129292.1.S1_at	CD935490	-	-	8e+0	At3g03272	-	C.G.	S.X.	Please select
0.03	1e-1	38	TaAffx.56436.1.S1_at	CA651657	-	-	1e+0	At4g35060	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please select
0.02	5e-1	36	Ta.12940.1.A1_at	CD491400	-	-	2e-8	At5g47960	ATRABA4C	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.7800.1.S1_at	CA649489	-	-	7e-2	At1g24200	paired amphipathic helix repeat-containing protein	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.128566.1.A1_at	CK214162	-	-	1e-4	At4g28660	PSB28 (PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN)	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.117624.1.S1_at	CA625474	-	-	4e+0	At1g33270	patatin-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e+0	32	Arabidopsis thaliana	At4g04953	6240320	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	PsAffx.CL1900Contig1_at	PsAffx.CL1900Contig1	-	-	1e+1	At4g22000	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	Hordeum vulgare	EBed02_SQ003_E04_at	EBed02_SQ003_E04	-	-	1e+0	At1g70850	MLP34 (MLP-LIKE PROTEIN 34)	C.G.	S.X.	Please select
0.06	2e-17	91	Oryza sativa	Os05g0106700	9633.m00072	-	Chromosome condensation regulator protein(Fragment)	1e-13	At5g42140	zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e-1	36	Populus trichocarpa	PtpAffx.144078.1.S1_at	CK107271	hypothetical protein	-	2e-21	At4g37130	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	8e+0	30	Vitis vinifera	1621147_s_at	CF415138	hypothetical protein LOC100247531	-	7e-1	At5g14530	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.03	7e-1	34	Zea mays	Zm.13272.3.S1_at	AI881412	bifunctional polymyxin resistance arnA protein	-	2e-18	At1g08200	AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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