CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.29215.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.0 Ta.29215.1.S1_at CD934480 - - 5e-5 At1g73650 oxidoreductase, acting on the CH-CH group of donors S.X. H.G.
0.61 82.0 Ta.10524.1.S1_at CK162419 - - 1e-8 At4g31720 TAFII15 (TBP-ASSOCIATED FACTOR II 15) S.X. H.G.
0.46 66.8 Ta.6595.1.S1_at CA680476 - - 2e+0 At5g23035 - S.X. H.G.
0.44 64.5 Ta.7818.1.S1_at CA648774 - - 8e-10 At5g47390 myb family transcription factor S.X. H.G.
0.43 62.2 Ta.99.1.S1_at CD866760 O-acetylserine (thiol) lyase - 5e-18 At4g14880 OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1) S.X. H.G.
0.40 58.4 Ta.99.1.S1_x_at CD866760 O-acetylserine (thiol) lyase - 5e-18 At4g14880 OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1) S.X. H.G.
0.35 49.8 TaAffx.97229.1.S1_at AJ613263 - - 1e-3 At3g27300 G6PD5 (glucose-6-phosphate dehydrogenase 5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.4 99.5 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.7 98.4 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3 98.2 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2 97.5 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0 97.4 GSM143515 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.8 97.2 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7 97.1 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6 97.0 GSM250888 TcLr34_3dpi_inoculated_rep1 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4 96.8 GSM143517 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.4 96.8 GSM250918 TcLr34_7dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.37 5e-147 521 TaAffx.56018.1.S1_x_at CA658481 - - 4e-9 At1g18180 oxidoreductase, acting on the CH-CH group of donors C.G. S.X.
0.37 5e-147 521 TaAffx.56018.1.S1_s_at CA658481 - - 4e-9 At1g18180 oxidoreductase, acting on the CH-CH group of donors C.G. S.X.
0.37 5e-147 521 TaAffx.56018.1.S1_at CA658481 - - 4e-9 At1g18180 oxidoreductase, acting on the CH-CH group of donors C.G. S.X.
0.02 2e-4 48 TaAffx.50087.1.S1_at CA746130 - - 3e+0 At5g60850 OBP4 C.G. S.X.
0.02 2e-4 48 TaAffx.23475.1.S1_at CA734769 - - 1e+1 At3g58910 F-box family protein C.G. S.X.
0.01 2e-4 48 Ta.9517.1.S1_at BQ605701 - - 3e-10 At2g33700 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.02 2e-4 48 Ta.9055.1.S1_at CK216444 - - 2e-28 At1g10670 ACLA-1 C.G. S.X.
0.02 2e-4 48 Ta.798.2.A1_a_at CK158966 - - 1e-16 At5g09650 AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6) C.G. S.X.
0.02 2e-4 48 Ta.798.2.A1_x_at CK158966 - - 1e-16 At5g09650 AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 5e-5 50 Arabidopsis thaliana At1g73650 843699 oxidoreductase, acting on the CH-CH group of donors F:oxidoreductase activity, acting on the CH-CH group of donors;P:lipid metabolic process;C:plasma membrane, vacuole;OBFMP - - - C.G. S.X.
0.02 7e-2 40 Glycine max GmaAffx.89866.1.A1_x_at CK605817 - - 4e+0 At3g07590 small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative C.G. S.X.
0.74 0 1610 Hordeum vulgare Contig8384_at Contig8384 - - 2e-3 At1g73650 oxidoreductase, acting on the CH-CH group of donors C.G. S.X.
0.45 2e-141 504 Oryza sativa Os.3167.1.S1_at - - - 0 C.G. S.X.
0.11 2e-24 115 Populus trichocarpa PtpAffx.153202.1.A1_s_at CV281368 hypothetical protein - 5e-10 At1g18180 oxidoreductase, acting on the CH-CH group of donors C.G. S.X.
0.13 8e-23 107 Vitis vinifera 1615830_at CA816489 hypothetical protein LOC100247422 - 1e-21 At1g18180 oxidoreductase, acting on the CH-CH group of donors C.G. S.X.
0.44 4e-124 444 Zea mays Zm.17299.1.S1_at CO521936 - - 9e-16 At1g18180 oxidoreductase, acting on the CH-CH group of donors C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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