CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.28883.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 89.1 Ta.28883.1.A1_at AJ612385 - - 5e+0 At5g20720 CPN20 (CHAPERONIN 20) S.X. H.G.
0.83 93.4 Ta.7261.2.A1_at BJ309551 - - 3e-1 At1g28960 ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15) S.X. H.G.
0.80 92.2 Ta.1964.1.S1_x_at CD890475 - - 2e+0 At3g13500 unknown protein S.X. H.G.
0.73 89.1 Ta.7261.2.A1_a_at BJ309551 - - 3e-1 At1g28960 ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15) S.X. H.G.
0.67 86.3 Ta.1964.3.S1_x_at CK213330 - - 2e+0 At3g13500 unknown protein S.X. H.G.
0.56 78.6 Ta.7649.2.S1_x_at BJ321934 - - 8e-5 At1g12410 CLP2 (CLP PROTEASE PROTEOLYTIC SUBUNIT 2) S.X. H.G.
0.48 69.0 Ta.13250.2.S1_x_at CK158867 - - 7e-4 At5g20720 CPN20 (CHAPERONIN 20) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.3 99.0 GSM343678 Wheat var. Kennedy_control_rep1 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.3 99.0 GSM343685 Wheat var. Kennedy_control_rep3 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.2 99.0 GSM343682 Wheat var. Kennedy_control_rep2 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.6 98.9 GSM343686 Wheat var. Kennedy_Fp inoculated_rep1 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.1 98.8 GSM343687 Wheat var. Kennedy_Fp inoculated_rep2 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.9 98.7 GSM343688 Wheat var. Kennedy_Fp inoculated_rep3 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.5 96.9 GSM314253 tissue type: germinating seed, coleoptile - rep3 GSE12508 Transcription patterns during wheat development
3.9 96.1 GSM314266 tissue type: seedling, leaf - rep1 GSE12508 Transcription patterns during wheat development
3.4 95.2 GSM324491 Si+ B- rep2 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.2 94.8 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.51 0 678 Ta.1321.1.S1_at CA711483 - - 2e+0 At5g09830 BolA-like family protein C.G. S.X.
0.51 0 678 Ta.1321.1.S1_s_at CA711483 - - 2e+0 At5g09830 BolA-like family protein C.G. S.X.
0.40 1e-120 432 Ta.1321.2.S1_at CA746785 - - 1e+0 At5g09830 BolA-like family protein C.G. S.X.
0.05 1e-6 54 Ta.13048.1.A1_at CA484462 - - 2e-3 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.14 5e-6 52 Ta.13250.1.S1_a_at CK153818 - - 2e-4 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.04 3e-4 46 Ta.26738.1.A1_at CD491007 - - 3e-2 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.12 3e-4 46 Ta.13250.2.S1_x_at CK158867 - - 7e-4 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.11 5e-3 42 Ta.13250.3.S1_at CA675670 - - 5e+0 At5g37760 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.04 2e-2 40 Ta.7981.1.S1_s_at CK156422 - - 4e-2 At3g61260 DNA-binding family protein / remorin family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 5e+0 32 Arabidopsis thaliana At5g20720 832195 CPN20 (CHAPERONIN 20) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES. - - - C.G. S.X.
0.03 2e+0 34 Glycine max GmaAffx.8845.2.S1_at BF597277 - - 8e-5 At2g39970 peroxisomal membrane protein (PMP36) C.G. S.X.
0.57 0 734 Hordeum vulgare Contig401_at Contig401 - - 2e+0 At5g09830 BolA-like family protein C.G. S.X.
0.44 5e-66 252 Oryza sativa Os09g0438700 BI802560 - 20 kDa chaperonin, chloroplast precursor (ProteinCpn21) (Chloroplast protein Cpn10) (Chloroplastchaperonin 10) (Ch-CPN10) (Chaperonin 20) 2e+0 At5g48605 - C.G. S.X.
0.03 7e+0 32 Populus trichocarpa PtpAffx.29112.1.A1_at DN488208 - - 1e+1 At5g28610 - C.G. S.X.
0.03 4e-4 44 Vitis vinifera 1614856_at CD718534 hypothetical protein LOC100267892 - 4e-11 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.36 6e-53 206 Zea mays Zm.1183.1.A1_at BG841428 hypothetical protein LOC100216904 - 6e-1 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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