Gene omics information

Query gene ID Ta.28850.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5779.2Ta.28850.1.S1_atBJ262711--1e-167At3g09840CDC48 (CELL DIVISION CYCLE 48)S.X.H.G.
0.7389.1Ta.7608.1.S1_x_atCD452795--7e-5At2g17200ubiquitin family proteinS.X.H.G.
0.6383.1Ta.95.1.S1_atM90663.1--4e-32At2g30110ATUBA1S.X.H.G.
0.5072.4Ta.1770.1.S1_a_atCK209608--6e-1At4g32930unknown proteinS.X.H.G.
0.5072.4Ta.9607.1.A1_a_atCA708572--5e+0At5g2451060s acidic ribosomal protein P1, putativeS.X.H.G.
0.5072.4Ta.1905.2.A1_x_atBE446722--2e-9At2g30110ATUBA1S.X.H.G.
0.3549.8Ta.21374.2.S1_atCK208435--8e-66At5g58290RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
2.994.0GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.893.6GSM111185genotype C22 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
2.692.9GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.492.0GSM111237genotype F38b developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
2.391.5GSM138184genotype C25 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.291.0GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.291.0GSM111231genotype B33 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
2.190.3GSM111251genotype A35 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
2.190.3GSM111221genotype H23 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
2.190.3GSM111245genotype G13 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.189e-107389TaAffx.7295.1.S1_atCA683289--4e+0At5g18920unknown proteinC.G.S.X.
0.151e-87325TaAffx.7295.2.S1_atCA662724--7e-2At3g09840CDC48 (CELL DIVISION CYCLE 48)C.G.S.X.
0.089e-27123TaAffx.112549.1.S1_atCA623060--3e-12At3g53230cell division cycle protein 48, putative / CDC48, putativeC.G.S.X.
0.101e-1379TaAffx.53049.1.S1_atCA697209--4e+0At5g14010zinc finger (C2H2 type) family proteinC.G.S.X.
0.013e-552Ta.30798.3.S1_atCK193564--1e-9At4g32940GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.014e-448Ta.1709.1.S1_atCK208738--2e-53At2g27600SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)C.G.S.X.
0.014e-448Ta.1709.1.S1_x_atCK208738--2e-53At2g27600SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)C.G.S.X.
0.022e-346Ta.25112.1.A1_atCA602848--3e-1At1g79610sodium proton exchanger, putative (NHX6)C.G.S.X.
0.012e-346Ta.1709.2.S1_a_atCA611032--6e-57At2g27600SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.611e-167591Arabidopsis thalianaAt3g09840820142CDC48 (CELL DIVISION CYCLE 48)Encodes a cell division cycle protein, a member of AAA-type ATPases gene family. Expressed throughout the plant in regions of cell division. Within the cell, sub-cellular localization varies depending on the stage of the cell cycle.Mutants in which the expression of CDC48A is altered show defects in cytokinesis, cell expansion and cell differentiation.---C.G.S.X.
0.508e-142506Glycine maxGma.4013.1.S1_atU20213.1plamsma membrane-associated AAA-ATPase-0At5g03340cell division cycle protein 48, putative / CDC48, putativeC.G.S.X.
0.410860Hordeum vulgareContig2036_s_atContig2036--8e-18At3g53230cell division cycle protein 48, putative / CDC48, putativeC.G.S.X.
0.7302482Oryza sativaOs03g0151800AK098980.1-Cell division control protein 48 homolog A(AtCDC48a)0At3g09840CDC48 (CELL DIVISION CYCLE 48)C.G.S.X.
0.429e-117422Populus trichocarpaPtp.4616.1.S1_atBP924637hypothetical protein-0At5g03340cell division cycle protein 48, putative / CDC48, putativeC.G.S.X.
0.232e-77289Vitis vinifera1610290_atCD720110--2e-132At5g03340cell division cycle protein 48, putative / CDC48, putativeC.G.S.X.
0.6901739Zea maysZm.1177.1.S1_atAY105040.1hypothetical protein LOC100274218-3e-112At5g03340cell division cycle protein 48, putative / CDC48, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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