Gene omics information

Query gene ID Ta.28571.1.S1_s_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5779.2Ta.28571.1.S1_s_atCA639817--8e-5At3g47810MAG1 (MAIGO 1)S.X.H.G.
0.7790.8Ta.30414.1.S1_atCA606112--4e-21At4g27880seven in absentia (SINA) family proteinS.X.H.G.
0.6786.3Ta.16493.1.A1_s_atCA607256--3e-1At1g78410VQ motif-containing proteinS.X.H.G.
0.3244.4TaAffx.22501.1.S1_atCN009170--4e-14At3g48330PIMT1 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 1)S.X.H.G.
0.3040.9Ta.2528.1.S1_atCD919475--3e-3At4g15470-S.X.H.G.
0.1821.0Ta.1474.1.S1_x_atCK167009--7e-28At3g52560UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
2.492.0GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.492.0GSM138154genotype H5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.492.0GSM138144Genotype RL4452 developing seed at 5 days after anthesis, biological rep1 location SBGSE5937Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
2.291.0GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
2.190.3GSM138164genotype D15 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.190.3GSM138163genotype E5 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.089.7GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.089.7GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.089.7GSM298081Leaf tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.089.7GSM111236genotype F38b developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.570684Ta.3560.1.S1_s_atBJ318088--2e-4At3g47810MAG1 (MAIGO 1)C.G.S.X.
0.018e-238Ta.1116.2.S1_atCK194769--1e-15At4g21660proline-rich spliceosome-associated (PSP) family proteinC.G.S.X.
0.033e-136TaAffx.7845.1.S1_atCA647279--3e-1At5g23100unknown proteinC.G.S.X.
0.033e-136TaAffx.58737.1.S1_atCA616756--4e+0At5g07500PEI1C.G.S.X.
0.033e-136TaAffx.54602.1.S1_atCA679543--3e-1At5g19875unknown proteinC.G.S.X.
0.023e-136Ta.7846.1.S1_atBQ160792--2e-7At3g09770zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.031e+034Ta.2892.3.S1_a_atBJ223891--4e-3At2g35210RPA (ROOT AND POLLEN ARFGAP)C.G.S.X.
0.045e+032TaAffx.79502.1.S1_atCA713958--3e+0At2g41930ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseC.G.S.X.
0.035e+032TaAffx.53577.1.S1_atCA691080--4e+0At5g17220ATGSTF12 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.458e-548Arabidopsis thalianaAt3g47810823935MAG1 (MAIGO 1)Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.---C.G.S.X.
0.322e-37157Glycine maxGma.1916.1.S1_atAW185983--1e-35At3g47810MAG1 (MAIGO 1)C.G.S.X.
0.580684Hordeum vulgareContig1352_atContig1352--6e-7At3g47810MAG1 (MAIGO 1)C.G.S.X.
0.361e-119430Oryza sativaOs02g0265400AK060027.1-Vacuolar protein sorting 29 (Vesicle proteinsorting 29) (hVPS29) (MDS007) (PEP11) (DC7/DC15). Spliceisoform 22e-25At3g47810MAG1 (MAIGO 1)C.G.S.X.
0.365e-47188Populus trichocarpaPtpAffx.5770.2.S1_atCV266078hypothetical protein-3e-64At3g47810MAG1 (MAIGO 1)C.G.S.X.
0.349e-42169Vitis vinifera1610551_atCF373106--3e-27At3g47810MAG1 (MAIGO 1)C.G.S.X.
0.372e-108391Zea maysZm.8987.1.A1_a_atCK347996hypothetical protein LOC100192764 /// vacuolar protein sorting 29-3e-15At3g47810MAG1 (MAIGO 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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