Gene omics information

Query gene ID Ta.28553.13.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2Ta.28553.13.S1_atBJ300199--5e-138At4g05320UBQ10 (POLYUBIQUITIN 10)S.X.H.G.
0.7188.0Ta.28553.13.S1_x_atBJ300199--5e-138At4g05320UBQ10 (POLYUBIQUITIN 10)S.X.H.G.
0.6383.1Ta.28553.10.S1_atBJ264471--3e-67At4g02890UBQ14S.X.H.G.
0.6182.0Ta.28553.14.A1_x_atBJ273013--1e-70At4g02890UBQ14S.X.H.G.
0.4767.9Ta.28553.12.S1_x_atBJ242344Polyubiquitin-9e-164At4g02890UBQ14S.X.H.G.
0.4464.5Ta.1709.1.S1_atCK208738--2e-53At2g27600SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.194.5GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.994.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.592.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.592.5GSM138137Genotype Domain developing seed at 5 days after anthesis, biological rep3 location SBGSE5937Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
2.492.0GSM138177genotype A40 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.291.0GSM143517Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.089.7GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat development
2.089.7GSM143516Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.089.7GSM143509Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.089.7GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9803206Ta.28553.13.S1_x_atBJ300199--5e-138At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.5801312Ta.28553.3.S1_atBJ274700Polyubiquitin-0At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.5801312Ta.28553.3.S1_x_atBJ274700Polyubiquitin-0At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.5301120Ta.28553.12.S1_x_atBJ242344Polyubiquitin-9e-164At4g02890UBQ14C.G.S.X.
0.520999TaAffx.128584.1.S1_s_atCK154688--1e-101At4g02890UBQ14C.G.S.X.
0.510898Ta.27292.1.S1_atAY297059.1ubiquitin-1e-100At4g02890UBQ14C.G.S.X.
0.440882Ta.28553.7.S1_x_atBJ262528Ubiquitin protein-3e-111At4g05050UBQ11 (UBIQUITIN 11)C.G.S.X.
0.440882Ta.28553.7.S1_atBJ262528Ubiquitin protein-3e-111At4g05050UBQ11 (UBIQUITIN 11)C.G.S.X.
0.360856Ta.28553.14.A1_x_atBJ273013--1e-70At4g02890UBQ14C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.715e-138492Arabidopsis thalianaAt4g05320825880UBQ10 (POLYUBIQUITIN 10)One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.---C.G.S.X.
0.600692Glycine maxGma.7789.1.S1_atBI321596--0At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.6501312Hordeum vulgareContig1051_s_atContig1051--0At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.6901479Oryza sativaOs02g0161900AK101547.1-Ubiquitin0At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.600670Populus trichocarpaPtp.2583.1.S1_atCV236763--4e-178At5g20620UBQ4C.G.S.X.
0.630636Vitis vinifera1616334_a_atCB917599--0At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.6301003Zea maysZm.7727.4.S1_s_atCF972403polyubiquitin containing 7 ubiquitin monomers /// ubiquitin /// polyubiquitin-2e-102At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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