Gene omics information

Query gene ID Ta.28479.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6583.9Ta.28479.1.S1_atBJ286275--9e-6At5g40780LHT1S.X.H.G.
0.6081.0Ta.6155.1.S1_atCD867059--1e-1At3g08890unknown proteinS.X.H.G.
0.6081.0TaAffx.12418.1.A1_atBJ265615--5e-12At5g38240serine/threonine protein kinase, putativeS.X.H.G.
0.5879.2Ta.6155.2.S1_a_atCA695243--3e-1At5g55340long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinS.X.H.G.
0.5273.7Ta.4479.2.S1_a_atCA735391--2e+0At3g23175lesion inducing protein-relatedS.X.H.G.
0.4767.9Ta.4479.2.S1_x_atCA735391--2e+0At3g23175lesion inducing protein-relatedS.X.H.G.
0.4565.2Ta.26901.1.S1_atCD373584--8e-1At1g06040STO (SALT TOLERANCE)S.X.H.G.
0.4464.5Ta.4479.1.S1_atCN011595--2e+0At3g08762unknown proteinS.X.H.G.
0.4464.5TaAffx.35394.2.A1_atBG906003--3e+0At5g50480NF-YC6 (NUCLEAR FACTOR Y, SUBUNIT C6)S.X.H.G.
0.4464.5Ta.22249.1.S1_atCA690737--3e+0At1g13880ELM2 domain-containing proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.599.6GSM143517Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
16.399.6GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
13.699.5GSM143519Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
12.899.4GSM250902Tc_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.999.4GSM143518Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
11.799.3GSM143520Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
11.099.3GSM143515Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.999.3GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.698.9GSM143516Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.798.4GSM250903TcLr1_7dpi_mock_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.382e-155549Ta.12339.1.S1_s_atBT009250.1--5e-15At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
0.382e-155549Ta.12339.1.S1_atBT009250.1--5e-15At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
0.231e-48194Ta.3869.1.S1_atCA674403--7e-14At5g40780LHT1C.G.S.X.
0.095e-23109TaAffx.7030.1.S1_atCA670474--1e-2At5g40780LHT1C.G.S.X.
0.022e-344Ta.30603.1.S1_x_atBJ239996--6e-7At2g36590ProT3 (PROLINE TRANSPORTER 3)C.G.S.X.
0.022e-344Ta.30603.1.S1_s_atBJ239996--6e-7At2g36590ProT3 (PROLINE TRANSPORTER 3)C.G.S.X.
0.022e-344Ta.10058.1.A1_atCK205233--1e-1At2g36590ProT3 (PROLINE TRANSPORTER 3)C.G.S.X.
0.021e-138Ta.7164.1.S1_atBJ229457--8e-68At3g62560GTP-binding protein, putativeC.G.S.X.
0.021e-138Ta.7164.2.S1_atCA699560--1e-9At3g62560GTP-binding protein, putativeC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.109e-652Arabidopsis thalianaAt5g40780834078LHT1Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.---C.G.S.X.
0.184e-1273Glycine maxGmaAffx.48461.1.S1_atAW396191--4e-15At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
0.113e-446Hordeum vulgareContig15915_atContig15915--2e-3At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
0.262e-64248Oryza sativaOs08g0127100AK065217.1-Lysine and histidine specific transporter3e-19At5g40780LHT1C.G.S.X.
0.121e-21105Populus trichocarpaPtpAffx.201014.1.S1_atpmrna1991lysine/histidine transporter-5e-17At1g67640lysine and histidine specific transporter, putativeC.G.S.X.
0.087e-754Vitis vinifera1617470_s_atBQ797931similar to LHT1 (LYSINE HISTIDINE TRANSPORTER 1); amino acid transmembrane transporter-6e-11At1g48640lysine and histidine specific transporter, putativeC.G.S.X.
0.345e-67254Zea maysZm.17174.1.A1_atCO531239hypothetical protein LOC100273979-2e-6At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage