Gene omics information

Query gene ID	Ta.2847.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	64.5	Ta.2847.1.S1_at	CK198392	-	-	7e-1	At4g26780	AR192	S.X.	H.G.	Please select
0.73	89.1	Ta.2363.2.S1_a_at	CA639571	-	-	2e-2	At3g44330	-	S.X.	H.G.	Please select
0.73	89.1	Ta.14476.3.A1_a_at	CK205268	-	-	1e+0	At1g33920	ATPP2-A4 (Phloem protein 2-A4)	S.X.	H.G.	Please select
0.60	81.0	Ta.14476.1.S1_x_at	CK154833	-	-	9e-25	At1g47640	unknown protein	S.X.	H.G.	Please select
0.44	64.5	Ta.14560.1.S1_at	BJ274621	-	-	2e-40	At5g63400	ADK1 (ADENYLATE KINASE 1)	S.X.	H.G.	Please select
0.35	49.8	Ta.28313.1.S1_at	BJ293939	-	-	1e-2	At2g21160	translocon-associated protein alpha (TRAP alpha) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.8	97.2	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.9	96.1	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
3.3	95.0	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
3.3	95.0	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	6e-14	79	TaAffx.57684.1.S1_at	CA626004	-	-	3e-1	At4g17310	unknown protein	C.G.	S.X.	Please select
0.02	3e-3	44	Ta.9155.1.S1_x_at	BQ238617	-	-	2e+0	At4g05030	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.02	3e-3	44	Ta.759.1.S1_at	U73216.1	cold acclimation protein WCOR413	-	6e-1	At3g50830	COR413-PM2 (COLD-REGULATED 413-PLASMA MEMBRANE 2)	C.G.	S.X.	Please select
0.02	3e-3	44	Ta.5804.1.S1_at	CK197990	-	-	2e-1	At5g34869	unknown protein	C.G.	S.X.	Please select
0.01	3e-3	44	Ta.5619.1.S1_s_at	BE430514	-	-	1e+0	At2g40370	LAC5 (laccase 5)	C.G.	S.X.	Please select
0.01	3e-3	44	Ta.5619.1.S1_x_at	BE430514	-	-	1e+0	At2g40370	LAC5 (laccase 5)	C.G.	S.X.	Please select
0.01	3e-3	44	Ta.4170.1.S1_at	CK194467	-	-	2e-1	At3g47960	proton-dependent oligopeptide transport (POT) family protein	C.G.	S.X.	Please select
0.01	3e-3	44	Ta.4170.1.S1_x_at	CK194467	-	-	2e-1	At3g47960	proton-dependent oligopeptide transport (POT) family protein	C.G.	S.X.	Please select
0.02	3e-3	44	Ta.19696.1.S1_at	CA656618	-	-	2e-1	At2g43180	catalytic	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	7e-1	36	Arabidopsis thaliana	At4g26780	828785	AR192	unknown function	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e-1	38	Glycine max	Gma.3177.1.S1_at	CD399870	-	-	2e-15	At4g26780	AR192	C.G.	S.X.	Please select
0.83	0	1729	Hordeum vulgare	Contig8906_at	Contig8906	-	-	2e-1	At4g26780	AR192	C.G.	S.X.	Please select
0.41	9e-110	398	Oryza sativa	Os09g0284400	AK110658.1	-	GrpE protein family protein	3e-6	At4g26780	AR192	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	4e-3	44	Populus trichocarpa	PtpAffx.25566.3.S1_at	BU863734	hypothetical protein	-	1e+0	At5g55200	co-chaperone grpE protein, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	3e+0	32	Vitis vinifera	1620167_at	CB970524	hypothetical protein LOC100247740	-	1e+0	At2g20450	60S ribosomal protein L14 (RPL14A)	C.G.	S.X.	Please select
0.33	5e-80	297	Zea mays	Zm.3646.1.A1_at	CA400978	hypothetical protein LOC100272696	-	2e-7	At4g26780	AR192	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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