Gene omics information

Query gene ID	Ta.28206.3.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.28206.3.S1_a_at	CA661286	-	-	2e-2	At3g02220	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.9785.1.S1_a_at	CD893368	-	-	5e+0	At5g16950	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.8142.1.S1_at	BQ752849	-	-	3e-15	At1g61620	phosphoinositide binding	S.X.	H.G.	Please select
0.63	83.1	Ta.5442.3.S1_a_at	CA598439	-	-	7e-2	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	S.X.	H.G.	Please select
0.60	81.0	Ta.5442.3.S1_x_at	CA598439	-	-	7e-2	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	S.X.	H.G.	Please select
0.40	58.4	Ta.7506.2.S1_a_at	BJ267303	-	-	5e-15	At1g27650	ATU2AF35A	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.3	99.2	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
9.1	99.0	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.6	98.9	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.1	98.5	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.8	98.4	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.4	98.2	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.1	98.1	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.1	98.1	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.0	98.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.46	2e-134	478	Ta.28206.1.S1_at	BQ162426	-	-	3e-2	At3g02220	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.51707.1.S1_at	CA720286	-	-	1e+0	At1g16560	Per1-like family protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.51707.1.S1_x_at	CA720286	-	-	1e+0	At1g16560	Per1-like family protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.112527.1.S1_x_at	BQ606406	-	-	3e-1	At5g65480	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.112527.1.S1_at	BQ606406	-	-	3e-1	At5g65480	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.111569.1.S1_at	CA644972	-	-	2e+1	At5g23920	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.5886.1.S1_at	CD917867	-	-	9e-2	At4g28890	protein binding / ubiquitin-protein ligase/ zinc ion binding	C.G.	S.X.	Please select
0.04	4e+0	32	Ta.28371.2.S1_at	CA627206	-	-	7e-17	At1g61780	postsynaptic protein-related	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.28371.1.S1_s_at	BJ215792	-	-	1e-19	At1g61780	postsynaptic protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e-2	40	Arabidopsis thaliana	At3g02220	821238	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	4e-1	36	Glycine max	PsAffx.C757000001_at	PsAffx.C757000001	-	-	1e+0	At1g24145	unknown protein	C.G.	S.X.	Please select
0.45	2e-130	464	Hordeum vulgare	Contig12246_at	Contig12246	-	-	3e-2	At3g02220	unknown protein	C.G.	S.X.	Please select
0.34	1e-63	244	Oryza sativa	Os01g0763000	AK099449.1	-	-	6e+0	Atcg00790	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.7686.1.S1_a_at	CV237234	-	-	8e-43	At4g00430	PIP1	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	30	Vitis vinifera	1609183_at	CF405348	-	-	2e-1	At1g32880	importin alpha-1 subunit, putative	C.G.	S.X.	Please select
0.32	1e-56	218	Zea mays	Zm.15295.1.A1_at	CK828159	hypothetical protein LOC100192805	-	4e-4	At3g02220	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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