Gene omics information

Query gene ID	Ta.28122.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.95	99.1	Ta.28122.1.S1_at	CA624634	-	-	2e+1	At5g19257	unknown protein	S.X.	H.G.	Please select
0.56	78.6	TaAffx.110652.1.S1_at	CA656567	-	-	1e-2	At2g23690	unknown protein	S.X.	H.G.	Please select
0.54	75.5	TaAffx.110167.1.S1_at	CA662870	-	-	4e+0	At4g14440	HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)	S.X.	H.G.	Please select
0.52	73.7	TaAffx.82721.1.S1_at	CA668034	-	-	3e+1	At4g20780	calcium-binding protein, putative	S.X.	H.G.	Please select
0.52	73.7	Ta.24389.1.S1_at	CA622168	-	-	9e-1	At5g54640	RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5)	S.X.	H.G.	Please select
0.52	73.7	TaAffx.107008.1.S1_at	CA707795	-	-	7e-2	At2g24940	AtMAPR2 (Arabidopsis thaliana membrane-associated progesterone binding protein 2)	S.X.	H.G.	Please select
0.49	69.7	TaAffx.120245.1.S1_at	BJ234869	-	-	1e-1	At4g17800	DNA-binding protein-related	S.X.	H.G.	Please select
0.49	69.7	TaAffx.31847.1.S1_at	CA606601	-	-	1e+0	At1g21864	-	S.X.	H.G.	Please select
0.48	69.0	TaAffx.99246.2.S1_at	CA657762	-	-	1e+0	At3g16770	ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN)	S.X.	H.G.	Please select
0.48	69.0	TaAffx.85723.1.S1_at	CA620198	-	-	1e+0	At4g13950	RALFL31 (ralf-like 31)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
38.7	99.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
13.6	99.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.6	99.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.1	99.2	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
9.7	99.1	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
8.2	98.8	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.8	98.7	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.2	98.5	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250907	Tc_7dpi_mock_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.70	2e-98	359	TaAffx.86134.1.S1_at	CA616450	-	-	2e+1	At5g01840	OFP1 (OVATE FAMILY PROTEIN 1)	C.G.	S.X.	Please select
0.09	8e-11	67	Ta.23377.1.S1_x_at	CK196448	-	-	2e+0	At1g62510	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.06	2e-8	59	Ta.14492.1.S1_at	CK199539	-	-	2e+0	At5g11660	unknown protein	C.G.	S.X.	Please select
0.06	8e-8	57	Ta.994.3.S1_at	CA604487	-	-	3e-1	At4g39250	ATRL1 (ARABIDOPSIS RAD-LIKE 1)	C.G.	S.X.	Please select
0.06	8e-8	57	Ta.994.3.S1_x_at	CA604487	-	-	3e-1	At4g39250	ATRL1 (ARABIDOPSIS RAD-LIKE 1)	C.G.	S.X.	Please select
0.07	8e-8	57	Ta.28162.1.S1_at	CA644875	-	-	8e+0	At1g27140	ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14)	C.G.	S.X.	Please select
0.08	5e-6	52	TaAffx.116865.2.S1_at	CA691106	-	-	2e+0	At2g48040	-	C.G.	S.X.	Please select
0.04	5e-6	52	Ta.994.1.S1_x_at	CK200364	-	-	8e+0	At5g08565	positive transcription elongation factor/ zinc ion binding	C.G.	S.X.	Please select
0.04	5e-6	52	Ta.994.1.S1_at	CK200364	-	-	8e+0	At5g08565	positive transcription elongation factor/ zinc ion binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e+1	30	Arabidopsis thaliana	At5g19257	6241193	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	6e+0	32	Glycine max	PsAffx.psZS011xB21f_s_at	PsAffx.psZS011xB21f	-	-	1e+1	Atmg00710	-	C.G.	S.X.	Please select
0.14	2e-10	65	Hordeum vulgare	Contig3783_at	Contig3783	-	-	4e-1	At2g30766	unknown protein	C.G.	S.X.	Please select
0.16	4e-8	59	Oryza sativa	Os10g0552800	AK062381.1	-	RCc3 protein	9e-2	At2g25820	transcription factor	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+1	30	Populus trichocarpa	PtpAffx.35136.1.S1_at	DN493145	-	-	5e+0	At5g37610	voltage-gated anion channel	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1622456_at	CF609276	hypothetical protein LOC100245907 /// hypothetical protein LOC100265993	-	2e-1	At5g65870	ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)	C.G.	S.X.	Please select
0.67	0	732	Zea mays	Zm.2376.1.A1_a_at	AF001634.1	physical impedance induced protein /// cortical cell-delineating protein	-	6e+0	At4g38130	HD1 (HISTONE DEACETYLASE 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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