CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.28109.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 86.3 Ta.28109.1.A1_at CA617283 - - 8e-2 At4g23430 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
0.57 79.2 Ta.12323.1.A1_at BQ172096 - - 6e+0 Atcg00050 - S.X. H.G.
0.50 72.4 Ta.4018.1.S1_at CD888469 - - 7e-4 At2g37540 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
0.44 64.5 Ta.17243.1.S1_at CA619044 - - 5e+0 At4g09460 ATMYB6 S.X. H.G.
0.44 64.5 Ta.11835.1.A1_at BQ170901 - - 3e+0 At1g35030 unknown protein S.X. H.G.
0.44 64.5 Ta.2925.1.S1_s_at BJ277030 - - 3e-15 At4g11820 MVA1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
45.8 99.9 GSM139925 Anther tetrads rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
42.8 99.9 GSM139926 Anther tetrads rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
39.5 99.9 GSM139930 Anther immature pollen rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
37.1 99.9 GSM139927 Anther tetrads rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
22.5 99.8 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.2 99.3 GSM139922 Anther telophaseI-telophaseII rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.6 98.9 GSM139924 Anther telophaseI-telophaseII rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.6 98.9 GSM139923 Anther telophaseI-telophaseII rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9 94.0 GSM139921 Anther diplotene-anaphaseI rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9 94.0 GSM139920 Anther diplotene-anaphaseI rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.51 0 694 Ta.4018.1.S1_at CD888469 - - 7e-4 At2g37540 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.03 3e-1 36 TaAffx.81151.1.S1_at CA689118 - - 2e-1 At1g78370 ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20) C.G. S.X.
0.04 3e-1 36 TaAffx.65037.1.A1_at BJ265215 - - 3e+0 At3g25520 ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5) C.G. S.X.
0.02 1e+0 34 TaAffx.87061.1.S1_at BJ306226 - - 2e-21 At3g11730 ATFP8 C.G. S.X.
0.03 1e+0 34 TaAffx.28668.1.S1_at CA657674 - - 4e+0 At5g43540 zinc finger (C2H2 type) family protein C.G. S.X.
0.03 1e+0 34 TaAffx.28668.1.S1_x_at CA657674 - - 4e+0 At5g43540 zinc finger (C2H2 type) family protein C.G. S.X.
0.03 1e+0 34 TaAffx.113137.1.S1_at CA618265 - - 5e-15 At4g38920 ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3) C.G. S.X.
0.01 1e+0 34 Ta.5071.1.S1_at CK196219 - - 3e-28 At5g55070 2-oxoacid dehydrogenase family protein C.G. S.X.
0.02 1e+0 34 Ta.4678.2.S1_at CK163938 WRKY8 transcription factor - 1e-2 At5g07600 oleosin / glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-2 38 Arabidopsis thaliana At4g23430 828442 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:chloroplast, chloroplast inner membrane, chloroplast envelope;BOMFPA - - - C.G. S.X.
0.03 2e+0 34 Glycine max PsAffx.psHB029xE09f_at PsAffx.psHB029xE09f - - 4e-4 At3g06410 nucleic acid binding / zinc ion binding C.G. S.X.
0.50 0 660 Hordeum vulgare Contig4531_at Contig4531 - - 1e-5 At2g37540 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.20 8e-28 125 Oryza sativa Os01g0151700 AK099949.1 - Short-chain dehydrogenase Tic32 5e-2 At2g37540 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.03 4e-1 36 Populus trichocarpa PtpAffx.201567.1.S1_at pmrna3074 hypothetical protein - 9e-2 At2g05420 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
0.05 9e-2 36 Vitis vinifera 1608387_at CB975768 - - 1e-1 At5g02540 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.24 6e-56 216 Zea mays Zm.19227.1.S1_at CO533358 - - 2e-7 At5g02540 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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