Gene omics information

Query gene ID	Ta.2803.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	83.1	Ta.2803.1.S1_at	BJ322551	-	-	1e+0	At5g46030	unknown protein	S.X.	H.G.	Please select
0.60	81.0	Ta.6268.1.A1_at	BJ306810	-	-	8e-2	At4g32551	LUG (LEUNIG)	S.X.	H.G.	Please select
0.55	76.8	Ta.13272.1.A1_s_at	CD885703	-	-	6e+0	At4g08790	nitrilase, putative	S.X.	H.G.	Please select
0.44	64.5	Ta.4661.1.S1_s_at	BG314545	-	-	2e-27	At5g47010	LBA1 (LOW-LEVEL BETA-AMYLASE 1)	S.X.	H.G.	Please select
0.40	58.4	Ta.3352.1.S1_at	CK206169	-	-	2e-52	At5g64270	splicing factor, putative	S.X.	H.G.	Please select
0.27	35.6	Ta.1143.1.S1_at	BF473597	-	-	1e-13	At1g64550	ATGCN3	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.0	97.4	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.7	97.1	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.6	97.0	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.3	95.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM298088	Crown tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	8e-2	40	TaAffx.82096.1.S1_at	CA677607	-	-	7e+0	At5g06660	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	36	TaAffx.85836.1.S1_at	CA619151	-	-	1e-12	At5g66880	SNRK2.3 (SUCROSE NONFERMENTING 1(SNF1)-RELATED PROTEIN KINASE 2.3)	C.G.	S.X.	Please select
0.01	1e+0	36	TaAffx.85239.1.S1_at	CA624535	-	-	3e-1	At2g03720	MRH6 (morphogenesis of root hair 6)	C.G.	S.X.	Please select
0.01	1e+0	36	TaAffx.65084.1.S1_at	BJ263078	-	-	4e-1	At3g12090	TET6 (TETRASPANIN6)	C.G.	S.X.	Please select
0.02	1e+0	36	TaAffx.118397.1.A1_at	BQ170379	-	-	2e+0	At1g45170	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	36	Ta.5177.3.S1_a_at	CK208859	-	-	7e-39	At5g13110	G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2)	C.G.	S.X.	Please select
0.01	1e+0	36	Ta.28378.3.A1_at	BJ299726	-	-	1e+0	At2g32360	ubiquitin family protein	C.G.	S.X.	Please select
0.01	1e+0	36	Ta.24219.1.S1_x_at	CK194901	-	-	9e-1	At5g63740	zinc finger protein-related	C.G.	S.X.	Please select
0.01	5e+0	34	TaAffx.91675.1.A1_at	BJ307274	-	-	9e-1	At5g51650	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	36	Arabidopsis thaliana	At5g46030	834644	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.01	4e-1	38	Glycine max	GmaAffx.93521.1.S1_at	CF809246	-	-	4e-4	At5g09820	plastid-lipid associated protein PAP / fibrillin family protein	C.G.	S.X.	Please select
0.78	0	2797	Hordeum vulgare	Contig7258_at	Contig7258	-	-	5e+0	At5g46030	unknown protein	C.G.	S.X.	Please select
0.17	4e-17	91	Oryza sativa	OsAffx.18174.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.01	4e-1	38	Populus trichocarpa	PtpAffx.200330.1.S1_x_at	pmrna655	hypothetical protein	-	3e-18	At5g42090	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	9e-2	38	Vitis vinifera	1619060_at	CA817769	-	-	1e+0	At3g57340	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.05	2e-13	77	Zea mays	Zm.12936.1.A1_at	AY108987.1	-	-	7e-1	At3g21338	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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