Gene omics information

Query gene ID	Ta.28018.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.28018.1.S1_at	CK159354	-	-	2e-27	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	S.X.	H.G.	Please select
0.47	67.9	Ta.1604.1.S1_at	CK155787	-	-	6e-8	At5g63840	RSW3 (RADIAL SWELLING 3)	S.X.	H.G.	Please select
0.30	40.9	Ta.8121.1.S1_at	CA699077	-	-	3e+0	At5g64720	unknown protein	S.X.	H.G.	Please select
0.27	35.6	Ta.10116.1.S1_a_at	CK194257	-	-	2e-45	At1g17470	ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1)	S.X.	H.G.	Please select
0.26	33.6	Ta.14416.2.A1_a_at	BJ271618	-	-	3e-4	At4g31180	aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative	S.X.	H.G.	Please select
0.17	19.8	Ta.12395.1.S1_at	CK208181	-	-	2e-2	At5g15610	proteasome family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.4	98.6	GSM139915	Anther pre-meiosis rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.7	98.4	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.6	98.3	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.1	98.1	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.8	97.9	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.6	97.8	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.1	97.5	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.8	97.2	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	2e-76	287	TaAffx.55901.1.S1_at	CA659689	-	-	1e-2	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	C.G.	S.X.	Please select
0.26	5e-31	137	Ta.14200.1.S1_at	BJ217155	-	-	1e-19	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	C.G.	S.X.	Please select
0.13	9e-17	89	TaAffx.112914.1.S1_at	CA619852	-	-	1e-12	At3g06720	IMPA-1 (IMPORTIN ALPHA ISOFORM 1)	C.G.	S.X.	Please select
0.07	9e-11	69	TaAffx.25294.1.S1_s_at	CA703039	-	-	2e-2	At3g06720	IMPA-1 (IMPORTIN ALPHA ISOFORM 1)	C.G.	S.X.	Please select
0.01	2e-2	42	TaAffx.65944.1.S1_at	BJ215663	-	-	2e+0	At1g16560	Per1-like family protein	C.G.	S.X.	Please select
0.01	8e-2	40	Ta.1137.1.S1_at	AF091803.1	starch synthase I	-	2e-8	At5g24300	SSI1 (SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1)	C.G.	S.X.	Please select
0.01	3e-1	38	TaAffx.143995.10.S1_x_at	AJ242531	-	-	1e-2	At1g14920	GAI (GIBBERELLIC ACID INSENSITIVE)	C.G.	S.X.	Please select
0.01	3e-1	38	TaAffx.143995.10.A1_at	AJ242531	-	-	1e-2	At3g06410	nucleic acid binding / zinc ion binding	C.G.	S.X.	Please select
0.01	3e-1	38	TaAffx.143995.10.S1_at	AJ242531	-	-	1e-2	At1g14920	GAI (GIBBERELLIC ACID INSENSITIVE)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.38	2e-27	125	Arabidopsis thaliana	At4g16143	827302	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	2e-43	178	Glycine max	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	C.G.	S.X.	Please select
0.88	0	3311	Hordeum vulgare	Contig4129_at	Contig4129	-	-	9e-26	At3g06720	IMPA-1 (IMPORTIN ALPHA ISOFORM 1)	C.G.	S.X.	Please select
0.66	0	1570	Oryza sativa	Os01g0253300	AB004660.1	-	Importin alpha 2	6e-24	At3g06720	IMPA-1 (IMPORTIN ALPHA ISOFORM 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.40	2e-80	301	Populus trichocarpa	PtpAffx.210864.1.S1_at	pmrna21339	hypothetical protein	-	1e-64	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.19	5e-31	135	Vitis vinifera	1607723_at	CF568821	-	-	5e-18	At3g06720	IMPA-1 (IMPORTIN ALPHA ISOFORM 1)	C.G.	S.X.	Please select
0.44	0	1041	Zea mays	Zm.4898.1.S1_at	BI417088	hypothetical protein LOC100279412	-	6e-25	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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