Gene omics information

Query gene ID	Ta.27940.1.A1_s_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.27940.1.A1_s_at	BQ169626	-	-	1e+0	At1g01380	ETC1 (ENHANCER OF TRY AND CPC 1)	S.X.	H.G.	Please select
0.50	72.4	Ta.2401.1.A1_at	CD883832	-	-	2e-1	At1g02440	ATARFD1A (ADP-ribosylation factor D1A)	S.X.	H.G.	Please select
0.36	51.9	Ta.3543.1.A1_at	BJ220370	-	-	3e-1	At2g17785	zinc-binding protein-related	S.X.	H.G.	Please select
0.33	46.9	TaAffx.13383.1.A1_at	BG904557	-	-	8e-1	At1g17800	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.22	27.1	Ta.5909.3.A1_x_at	BJ298528	-	-	7e+0	At4g27350	unknown protein	S.X.	H.G.	Please select
0.22	27.1	Ta.12929.1.S1_at	CD938190	-	-	2e+0	At4g24275	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.9	98.7	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.2	98.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.2	98.1	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.8	97.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.97	0	1372	Ta.27940.1.A1_at	BQ169626	-	-	1e+0	At1g01380	ETC1 (ENHANCER OF TRY AND CPC 1)	C.G.	S.X.	Please select
0.80	0	997	Ta.13188.1.A1_at	BQ169725	-	-	2e+0	At4g12820	F-box family protein	C.G.	S.X.	Please select
0.25	9e-33	141	TaAffx.12740.1.S1_at	BJ238521	-	-	1e+0	At5g64180	unknown protein	C.G.	S.X.	Please select
0.21	1e-31	137	Ta.25403.1.A1_a_at	CD452620	-	-	1e+0	At2g05915	unknown protein	C.G.	S.X.	Please select
0.34	1e-25	117	TaAffx.2425.1.A1_at	BJ238256	-	-	1e+0	At1g02816	unknown protein	C.G.	S.X.	Please select
0.12	4e-4	46	Ta.13392.1.S1_at	BJ272522	-	-	7e+0	At4g16750	DRE-binding transcription factor, putative	C.G.	S.X.	Please select
0.08	6e-3	42	TaAffx.53957.1.S1_at	CD921389	-	-	2e+1	At5g17150	-	C.G.	S.X.	Please select
0.04	2e-2	40	TaAffx.57718.1.S1_at	CA625650	-	-	2e+0	At1g64640	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.15541.1.S1_at	CA485386	-	-	2e-5	At5g21170	5'-AMP-activated protein kinase beta-2 subunit, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At1g01380	838096	ETC1 (ENHANCER OF TRY AND CPC 1)	ETC1 is involved in trichome and root hair patterning in Arabidopsis.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	GmaAffx.3025.2.A1_at	CD396545	-	-	3e+0	At2g23067	unknown protein	C.G.	S.X.	Please select
0.07	8e-10	63	Hordeum vulgare	Contig16787_at	Contig16787	-	-	2e+0	At3g11320	organic anion transmembrane transporter	C.G.	S.X.	Please select
0.03	3e+0	34	Oryza sativa	OsAffx.9269.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.75857.1.A1_at	CV254905	porin/voltage-dependent anion-selective channel protein	-	2e+0	At2g26370	MD-2-related lipid recognition domain-containing protein / ML domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e+0	32	Vitis vinifera	1616381_at	CF212692	-	-	2e+0	At3g03773	-	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	ZmAffx.1333.1.S1_s_at	11990232-81	-	-	5e-50	Atcg01120	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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