CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.27783.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.27783.1.S1_at BQ237765 - - 2e-19 At4g15415 ATB' GAMMA S.X. H.G.
0.67 86.3 Ta.8457.2.A1_at BQ161925 - - 1e+1 At4g00220 JLO (JAGGED LATERAL ORGANS) S.X. H.G.
0.50 72.4 TaAffx.11930.1.S1_s_at CA639901 - - 3e-5 At2g30330 GCN5L1 family protein S.X. H.G.
0.47 67.9 Ta.3348.1.S1_a_at BJ314622 - - 3e-52 At1g14400 UBC1 (UBIQUITIN CARRIER PROTEIN 1) S.X. H.G.
0.40 58.4 Ta.13995.1.S1_at CK195574 - - 1e-3 At5g56190 WD-40 repeat family protein S.X. H.G.
0.30 40.9 Ta.9207.1.S1_at CK212610 - - 1e-8 At1g79590 SYP52 (SYNTAXIN OF PLANTS 52) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.8 98.4 GSM314278 tissue type: anthers, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
5.3 97.6 GSM314280 tissue type: anthers, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
4.4 96.8 GSM314279 tissue type: anthers, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
3.8 96.0 GSM143525 Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.7 95.8 GSM143526 Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.6 95.6 GSM314273 tissue type: floral bracts, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
3.4 95.2 GSM139931 Anther maturea nthers rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.3 95.0 GSM139933 Anther mature anthers rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2 94.8 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
3.1 94.5 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.43 7e-146 517 TaAffx.30343.1.S1_at CA626029 - - 1e-9 At4g15415 ATB' GAMMA C.G. S.X.
0.15 3e-25 117 Ta.8123.1.S1_at BE444510 - - 2e-3 At1g13460 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative C.G. S.X.
0.05 5e-2 40 TaAffx.2991.1.S1_at CA653919 - - 2e-7 At3g21650 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative C.G. S.X.
0.01 7e-1 36 Ta.8060.1.S1_at CA731350 - - 2e-4 At5g12210 geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative C.G. S.X.
0.02 1e+1 32 TaAffx.35464.1.S1_at BQ607289 - - 9e-1 At5g65080 MAF5 (MADS AFFECTING FLOWERING 5) C.G. S.X.
0.02 1e+1 32 TaAffx.112671.3.S1_at CA622054 - - 3e-10 At1g17880 nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative C.G. S.X.
0.02 1e+1 32 TaAffx.112671.2.S1_at CA621840 - - 7e-2 At1g17880 nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative C.G. S.X.
0.02 1e+1 32 TaAffx.112671.1.S1_at CA622289 - - 3e-7 At1g73230 nascent polypeptide-associated complex (NAC) domain-containing protein C.G. S.X.
0.02 1e+1 32 TaAffx.111170.1.S1_at CA646692 - - 1e+0 At4g24990 ATGP4 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 2e-19 97 Arabidopsis thaliana At4g15415 827211 ATB' GAMMA B' regulatory subunit of PP2A (AtB'gamma) - - - C.G. S.X.
0.12 7e-8 59 Glycine max GmaAffx.51197.2.S1_at BM887157 - - 3e-40 At4g15415 ATB' GAMMA C.G. S.X.
0.90 0 2054 Hordeum vulgare Contig10916_at Contig10916 - - 8e-16 At4g15415 ATB' GAMMA C.G. S.X.
0.38 0 803 Oryza sativa Os08g0122000 AK067159.1 - B' regulatory subunit of PP2A 6e-12 At3g26020 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative C.G. S.X.
0.29 3e-50 200 Populus trichocarpa PtpAffx.208634.1.S1_x_at pmrna17136 hypothetical protein - 8e-38 At3g26020 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative C.G. S.X.
0.29 2e-50 198 Vitis vinifera 1622878_at CD717524 - - 5e-57 At3g26020 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative C.G. S.X.
0.29 1e-40 167 Zea mays Zm.19123.1.A1_at BM348809 - - 9e-12 At3g26020 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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