Gene omics information

Query gene ID	Ta.27775.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.95	99.1	Ta.27775.1.S1_at	CA709194	-	-	3e+0	Atcg00550	-	S.X.	H.G.	Please select
0.82	92.7	TaAffx.48201.1.S1_x_at	CD886641	-	-	4e+0	At5g40750	-	S.X.	H.G.	Please select
0.78	91.1	TaAffx.48201.1.S1_s_at	CD886641	-	-	4e+0	At5g40750	-	S.X.	H.G.	Please select
0.67	86.3	Ta.21878.1.S1_x_at	CA705928	-	-	4e+0	At4g04090	speckle-type POZ protein-related	S.X.	H.G.	Please select
0.67	86.3	Ta.9877.1.S1_x_at	CD892356	-	-	5e-2	At5g49650	xylulose kinase, putative	S.X.	H.G.	Please select
0.63	83.1	Ta.10046.1.S1_at	CA709119	-	-	4e+0	At1g71260	ATWHY2 (A. THALIANA WHIRLY 2)	S.X.	H.G.	Please select
0.62	82.3	TaAffx.107060.1.S1_s_at	CA706857	-	-	7e+0	At3g01830	calmodulin-related protein, putative	S.X.	H.G.	Please select
0.61	82.0	Ta.21878.1.S1_at	CA705928	-	-	4e+0	At4g04090	speckle-type POZ protein-related	S.X.	H.G.	Please select
0.59	79.8	TaAffx.5435.1.S1_at	CA711772	-	-	4e+0	At3g43083	LCR33 (Low-molecular-weight cysteine-rich 33)	S.X.	H.G.	Please select
0.57	79.2	Ta.25687.1.S1_at	CD373888	-	-	4e+0	At2g34440	AGL29 (AGAMOUS-LIKE 29)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
24.0	99.8	GSM111232	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
19.0	99.7	GSM111245	genotype G13 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
18.9	99.7	GSM111175	genotype G30 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
18.2	99.7	GSM111204	genotype B10 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
16.5	99.6	GSM111241	genotype F82 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
14.8	99.5	GSM111197	genotype J15 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
14.4	99.5	GSM111248	genotype F87 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
11.6	99.3	GSM111177	genotype E5 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
11.1	99.3	GSM138146	genotype G13 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.1	99.2	GSM111234	genotype F44 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.80	8e-140	496	Ta.9877.1.S1_x_at	CD892356	-	-	5e-2	At5g49650	xylulose kinase, putative	C.G.	S.X.	Please select
0.79	1e-92	339	TaAffx.48201.1.S1_x_at	CD886641	-	-	4e+0	At5g40750	-	C.G.	S.X.	Please select
0.79	1e-92	339	TaAffx.48201.1.S1_s_at	CD886641	-	-	4e+0	At5g40750	-	C.G.	S.X.	Please select
0.33	3e-19	95	TaAffx.107021.1.S1_at	CA707574	-	-	3e-3	At4g15975	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.33	3e-19	95	TaAffx.107021.1.S1_x_at	CA707574	-	-	3e-3	At4g15975	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.24	2e-14	79	Ta.13824.1.S1_x_at	CD937305	-	-	9e-1	At3g20395	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.08	9e-7	54	Ta.28315.1.S1_at	BT009013.1	-	-	6e-1	At3g13437	unknown protein	C.G.	S.X.	Please select
0.12	6e-5	48	Ta.1264.1.S1_x_at	CD890927	-	-	8e-1	At4g15975	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.03	4e-3	42	TaAffx.79730.1.S1_at	CA705431	Flavanone 3-dioxygenase	-	2e-15	At3g51240	F3H (FLAVANONE 3-HYDROXYLASE)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	3e+0	32	Arabidopsis thaliana	Atcg00550	-	-	PSII component	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	7e-2	38	Glycine max	GmaAffx.51654.1.S1_at	AW185244	-	-	6e-7	At3g46290	protein kinase, putative	C.G.	S.X.	Please select
0.03	6e+0	30	Hordeum vulgare	rbaal1o24_at	rbaal1o24	-	-	4e-50	At4g05050	UBQ11 (UBIQUITIN 11)	C.G.	S.X.	Please select
0.03	2e+0	34	Oryza sativa	Os.24484.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	5e+0	32	Populus trichocarpa	PtpAffx.30497.1.A1_at	CV273424	-	-	4e+0	At3g07195	proline-rich family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e-1	34	Vitis vinifera	1611343_at	CB974830	hypothetical protein LOC100261168	-	6e+0	At3g15210	ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)	C.G.	S.X.	Please select
0.03	2e-2	38	Zea mays	Zm.6198.1.A1_at	CK370554	hypothetical protein LOC100277123	-	2e+0	At2g37860	LCD1 (LOWER CELL DENSITY 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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