Gene omics information

Query gene ID	Ta.27744.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.27744.1.S1_x_at	CA610821	-	-	4e+0	At5g18280	ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2)	S.X.	H.G.	Please select
0.91	98.2	Ta.27744.2.S1_a_at	CA618050	-	-	2e+0	At1g02813	unknown protein	S.X.	H.G.	Please select
0.80	92.2	Ta.2534.1.S1_at	BJ307067	-	-	1e-2	At4g28940	catalytic	S.X.	H.G.	Please select
0.73	89.1	Ta.5382.1.S1_x_at	CK198858	-	-	1e+1	At2g23340	AP2 domain-containing transcription factor, putative	S.X.	H.G.	Please select
0.67	86.3	Ta.23034.1.A1_s_at	CA722030	-	-	3e-1	At5g12190	RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.11	12.4	Ta.1967.2.A1_x_at	AJ614579	-	-	9e-1	At5g18600	glutaredoxin family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
30.2	99.8	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
26.7	99.8	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
25.1	99.8	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
24.8	99.8	GSM298080	Leaf tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
18.2	99.7	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
18.2	99.7	GSM298053	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
18.1	99.7	GSM298054	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
15.9	99.6	GSM298055	Leaf tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
12.3	99.4	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
11.2	99.3	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.51	0	692	Ta.27744.2.S1_a_at	CA618050	-	-	2e+0	At1g02813	unknown protein	C.G.	S.X.	Please select
0.21	3e-81	303	Ta.27744.3.S1_at	CA612044	-	-	4e+0	At3g16240	DELTA-TIP	C.G.	S.X.	Please select
0.29	3e-38	161	Ta.3304.1.S1_at	BJ243222	-	-	2e-1	At1g12760	protein binding / ubiquitin-protein ligase/ zinc ion binding	C.G.	S.X.	Please select
0.20	1e-31	139	TaAffx.57571.1.S1_at	CA626944	-	-	1e-1	At4g12340	-	C.G.	S.X.	Please select
0.18	3e-25	117	Ta.8919.1.S1_at	BQ162635	-	-	4e-1	At3g44935	unknown protein	C.G.	S.X.	Please select
0.09	5e-18	93	TaAffx.113232.1.S1_at	CA617055	-	-	1e+0	At1g70720	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.05	1e-9	65	Ta.1667.1.A1_at	CD452623	-	-	6e+0	At5g55893	unknown protein	C.G.	S.X.	Please select
0.08	1e-6	56	Ta.29559.2.A1_at	BJ286244	-	-	2e-1	At2g20590	reticulon family protein	C.G.	S.X.	Please select
0.16	2e-5	52	Ta.8298.1.S1_at	BQ161709	-	-	2e+0	At4g28485	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e+0	34	Arabidopsis thaliana	At5g18280	831946	ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2)	Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e-1	38	Glycine max	GmaAffx.83700.1.S1_at	BU965231	-	-	2e-1	At4g29980	unknown protein	C.G.	S.X.	Please select
0.66	0	1094	Hordeum vulgare	Contig3332_at	Contig3332	-	-	2e-1	At3g21215	RNA-binding protein, putative	C.G.	S.X.	Please select
0.28	2e-25	119	Oryza sativa	Os11g0126800	AK059453.1	-	Hypothetical protein	9e-2	At5g18280	ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	4e-4	48	Populus trichocarpa	PtpAffx.103517.1.S1_at	CK103253	hypothetical protein	-	8e-20	At5g18280	ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.01	1e+0	34	Vitis vinifera	1613877_at	BQ800323	hypothetical protein LOC100244974	-	1e+0	At5g37680	ATARLA1A (ADP-ribosylation factor-like A1A)	C.G.	S.X.	Please select
0.03	4e-4	46	Zea mays	Zm.3706.1.S1_at	CO526030	hypothetical protein LOC100272244	-	2e-1	At3g04080	ATAPY1 (APYRASE 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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