Gene omics information

Query gene ID	Ta.27728.1.S1_at
Gene name	triose phosphate translocator
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.75	89.8	Ta.27728.1.S1_at	AF314182.2	triose phosphate translocator	-	3e-22	At5g46110	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	S.X.	H.G.	Please select
0.87	94.2	Ta.28361.2.S1_at	CK216267	-	-	8e+0	At4g01150	unknown protein	S.X.	H.G.	Please select
0.85	93.8	Ta.27751.2.S1_x_at	CK214731	-	-	4e-27	At2g34420	LHB1B2	S.X.	H.G.	Please select
0.84	93.6	Ta.28361.2.S1_x_at	CK216267	-	-	8e+0	At4g01150	unknown protein	S.X.	H.G.	Please select
0.84	93.6	Ta.1969.1.S1_a_at	BE216986	-	-	5e-7	At2g20260	PSAE-2 (photosystem I subunit E-2)	S.X.	H.G.	Please select
0.81	92.4	Ta.27751.6.S1_at	BJ286005	-	-	1e-28	At2g34420	LHB1B2	S.X.	H.G.	Please select
0.77	90.8	Ta.24304.2.S1_a_at	CK212788	-	-	3e-1	At1g03130	PSAD-2 (photosystem I subunit D-2)	S.X.	H.G.	Please select
0.77	90.8	Ta.1130.2.S1_x_at	CK212780	-	-	5e-26	At5g54270	LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)	S.X.	H.G.	Please select
0.75	89.8	Ta.1130.1.S1_a_at	BG907492	-	-	2e-7	At1g29930	CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1)	S.X.	H.G.	Please select
0.73	89.1	Ta.506.1.S1_a_at	BJ265323	-	-	6e-48	At4g38970	fructose-bisphosphate aldolase, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.7	97.1	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM298054	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM298055	Leaf tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM298066	Leaf tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298065	Leaf tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298053	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298056	Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.33	7e-60	232	TaAffx.122974.1.S1_at	CA660914	-	-	9e-15	At5g46110	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	C.G.	S.X.	Please select
0.16	5e-24	113	Ta.4449.1.A1_at	CD453558	-	-	4e-1	At2g35850	unknown protein	C.G.	S.X.	Please select
0.09	3e-19	97	TaAffx.110452.1.S1_at	CA658778	-	-	4e+0	At4g21160	ZAC	C.G.	S.X.	Please select
0.05	7e-17	89	TaAffx.6514.1.S1_at	CA745379	-	-	2e+0	At1g25400	unknown protein	C.G.	S.X.	Please select
0.05	7e-17	89	TaAffx.6514.1.S1_x_at	CA745379	-	-	2e+0	At1g25400	unknown protein	C.G.	S.X.	Please select
0.03	9e-4	46	Ta.7909.1.S1_at	BQ160898	-	-	6e-18	At1g74880	NDH-O (NAD(P)H:plastoquinone dehydrogenase complex subunit O)	C.G.	S.X.	Please select
0.01	1e-2	42	Ta.7573.1.S1_at	BJ253846	-	-	2e-19	At4g23040	UBX domain-containing protein	C.G.	S.X.	Please select
0.02	8e-1	36	TaAffx.81777.1.S1_at	CA682076	-	-	4e+0	At4g37450	AGP18 (ARABINOGALACTAN PROTEIN 18)	C.G.	S.X.	Please select
0.02	8e-1	36	TaAffx.79657.1.S1_at	CA711220	-	-	4e-3	At1g78370	ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.24	3e-22	107	Arabidopsis thaliana	At5g46110	834652	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.12	2e-26	121	Glycine max	Gma.11183.1.S1_at	CD396098	Putative plastid triose phophate translocator mRNA, partial cds; nuclear gene for plastid product	-	2e-88	At5g46110	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	C.G.	S.X.	Please select
0.79	0	1457	Hordeum vulgare	Contig3114_at	Contig3114	-	-	5e-18	At5g46110	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	C.G.	S.X.	Please select
0.77	0	1550	Oryza sativa	Os01g0239200	BX900663	-	Triose phosphate/phosphate translocator	3e-25	At5g46110	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.13	1e-21	105	Populus trichocarpa	PtpAffx.381.2.A1_at	CV236504	hypothetical protein	-	2e-75	At5g46110	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.32	1e-33	143	Vitis vinifera	1620461_at	CA818763	hypothetical protein LOC100257292	-	2e-96	At5g46110	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	C.G.	S.X.	Please select
0.51	1e-170	599	Zea mays	Zm.150.1.A1_a_at	AY103868.1	triose phosphate/phosphate translocator	-	1e-21	At5g46110	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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