Gene omics information

Query gene ID	Ta.27658.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.27658.1.S1_at	BT009528.1	-	-	8e-29	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	S.X.	H.G.	Please select
0.55	76.8	TaAffx.37032.1.S1_at	BJ304229	-	-	2e+0	At3g27025	unknown protein	S.X.	H.G.	Please select
0.36	51.9	Ta.5396.2.S1_a_at	BJ287380	-	-	5e+0	At5g48820	ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE)	S.X.	H.G.	Please select
0.18	21.0	Ta.731.1.S1_at	BE516718	-	-	1e-1	At4g28170	unknown protein	S.X.	H.G.	Please select
0.13	14.6	Ta.28535.1.S1_at	BJ289039	-	-	1e+0	At5g55135	unknown protein	S.X.	H.G.	Please select
0.06	7.6	Ta.14499.1.S1_at	BJ298784	-	-	1e+0	At3g50830	COR413-PM2 (COLD-REGULATED 413-PLASMA MEMBRANE 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
120.0	100.0	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
85.9	100.0	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
77.8	100.0	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
7.1	98.5	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.7	98.4	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
2.3	91.5	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.3	91.5	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
2.3	91.5	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
2.2	91.0	GSM314257	tissue type: germinating seed, embryo - rep1	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.53	0	940	Ta.1203.1.S1_at	BE515598	-	-	3e-12	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	C.G.	S.X.	Please select
0.10	2e-32	141	Ta.30552.1.S1_x_at	BJ322102	-	-	3e-15	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	C.G.	S.X.	Please select
0.12	2e-32	141	Ta.30552.1.S1_s_at	BJ322102	-	-	3e-15	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	C.G.	S.X.	Please select
0.12	2e-23	111	TaAffx.12381.1.S1_at	BJ268713	-	-	2e-8	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	C.G.	S.X.	Please select
0.01	1e+0	36	Ta.5992.1.S1_at	BT009275.1	-	-	5e-1	At5g59950	RNA and export factor-binding protein, putative	C.G.	S.X.	Please select
0.01	4e+0	34	Ta.3249.2.S1_x_at	CK215785	-	-	2e-37	At2g34420	LHB1B2	C.G.	S.X.	Please select
0.01	4e+0	34	Ta.3249.3.A1_at	CK211276	-	-	1e-22	At1g29920	CAB2 (CHLOROPHYLL A/B-BINDING PROTEIN 2)	C.G.	S.X.	Please select
0.01	4e+0	34	Ta.23144.1.S1_at	CD373545	-	-	3e+0	At3g53780	rhomboid family protein	C.G.	S.X.	Please select
0.01	4e+0	34	Ta.15453.1.S1_at	CA484821	-	-	6e-2	At2g17070	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	8e-29	129	Arabidopsis thaliana	At2g19450	816464	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	2e-21	105	Glycine max	GmaAffx.2738.1.S1_at	CA938141	diacylglycerol acyltransferase	-	3e-44	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	C.G.	S.X.	Please select
0.09	5e-7	56	Hordeum vulgare	Contig17142_at	Contig17142	-	-	1e-3	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	C.G.	S.X.	Please select
0.28	3e-70	268	Oryza sativa	Os06g0563900	9634.m03501	-	Acyl CoA:diacylglycerol acyltransferase (EC2.3.1.20) (Fragment)	1e-14	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	2e-45	184	Populus trichocarpa	PtpAffx.39620.1.S1_at	DN487069	hypothetical protein	-	3e-54	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.01	2e+1	30	Vitis vinifera	1620845_at	CB971125	hypothetical protein LOC100252459	-	7e-14	At4g19950	unknown protein	C.G.	S.X.	Please select
0.26	6e-77	287	Zea mays	Zm.8679.1.A1_at	BM348355	-	-	4e-5	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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