Gene omics information

Query gene ID	Ta.2758.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.2758.1.S1_at	AY293828.1	-	-	1e-6	At5g43360	PHT3 (PHOSPHATE TRANSPORTER 3)	S.X.	H.G.	Please select
0.91	98.2	TaAffx.84384.1.S1_at	CA638101	-	-	6e+0	At5g43650	basic helix-loop-helix (bHLH) family protein	S.X.	H.G.	Please select
0.91	98.2	Ta.13950.1.S1_x_at	CK199480	-	-	2e+0	At1g62510	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	S.X.	H.G.	Please select
0.83	93.4	Ta.24626.1.S1_at	CA637891	-	-	7e-1	At1g07210	30S ribosomal protein S18 family	S.X.	H.G.	Please select
0.67	86.3	Ta.18672.1.S1_x_at	CA603610	-	-	3e-1	At1g07610	MT1C	S.X.	H.G.	Please select
0.67	86.3	Ta.5458.1.S1_x_at	CA615319	-	-	1e-1	At2g22980	serine-type carboxypeptidase	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
188.9	100.0	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
145.6	100.0	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
33.2	99.9	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
0.0	30.7	GSM298053	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
0.0	30.7	GSM111210	genotype B11 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
0.0	30.7	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
0.0	30.7	GSM138171	genotype C31 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
0.0	30.7	GSM246389	SB10_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
0.0	30.7	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development
0.0	30.7	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.27	2e-30	135	Ta.10084.1.S1_at	AF110180.1	high-affinity phosphate transporter PT1	-	3e-7	At5g43360	PHT3 (PHOSPHATE TRANSPORTER 3)	C.G.	S.X.	Please select
0.06	2e-26	121	TaAffx.130064.2.S1_at	CA623610	-	-	4e+0	At1g76430	phosphate transporter family protein	C.G.	S.X.	Please select
0.18	2e-24	115	Ta.18863.1.S1_a_at	CA607963	-	-	2e-6	At5g43360	PHT3 (PHOSPHATE TRANSPORTER 3)	C.G.	S.X.	Please select
0.06	5e-18	93	TaAffx.130064.3.S1_s_at	CA680862	-	-	3e-4	At2g38940	ATPT2 (ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2)	C.G.	S.X.	Please select
0.06	5e-18	93	TaAffx.130064.3.S1_x_at	CA680862	High-affinity phosphate transporter PT1	-	3e-4	At2g38940	ATPT2 (ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2)	C.G.	S.X.	Please select
0.05	2e-14	81	Ta.16597.1.S1_at	CA609271	-	-	2e-1	At3g23727	SCRL12 (SCR-Like 12)	C.G.	S.X.	Please select
0.02	4e-3	44	Ta.9253.1.S1_at	CK197206	-	-	7e-5	At1g30470	SIT4 phosphatase-associated family protein	C.G.	S.X.	Please select
0.02	2e-2	42	Ta.22986.1.S1_x_at	BJ307901	-	-	2e-22	At1g77120	ADH1 (ALCOHOL DEHYDROGENASE 1)	C.G.	S.X.	Please select
0.02	7e-2	40	TaAffx.131227.1.S1_at	CA685834	-	-	9e+0	At1g17990	12-oxophytodienoate reductase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	1e-6	56	Arabidopsis thaliana	At5g43360	834354	PHT3 (PHOSPHATE TRANSPORTER 3)	phosphate transporter	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-1	38	Glycine max	PsAffx.C2000277_at	PsAffx.C2000277	-	-	2e-1	At3g46910	ubiquitin protein ligase binding	C.G.	S.X.	Please select
0.20	6e-22	105	Hordeum vulgare	Contig7944_at	Contig7944	-	-	1e-1	At5g43370	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1)	C.G.	S.X.	Please select
0.55	9e-123	442	Oryza sativa	Os03g0150800	AY332471.1	-	High affinity phosphate transporter 2 (Phosphatetransporter)	1e-12	At5g43340	PHT6	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.12	1e-7	59	Populus trichocarpa	PtpAffx.205756.1.S1_at	pmrna11366	high affinity inorganic phosphate transporter	-	1e-46	At2g38940	ATPT2 (ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e-6	52	Vitis vinifera	1607681_at	CD802479	hypothetical protein LOC100257925	-	5e-28	At5g43370	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1)	C.G.	S.X.	Please select
0.34	6e-56	218	Zea mays	Zm.7659.1.S1_at	AY639019.1	phosphate transport protein	-	5e-12	At5g43360	PHT3 (PHOSPHATE TRANSPORTER 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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