Gene omics information

Query gene ID	Ta.27457.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.27457.1.S1_x_at	CD894008	-	-	2e-9	At3g09390	MT2A (METALLOTHIONEIN 2A)	S.X.	H.G.	Please select
0.91	98.2	Ta.27457.7.S1_x_at	CD861404	-	-	2e-9	At3g09390	MT2A (METALLOTHIONEIN 2A)	S.X.	H.G.	Please select
0.91	98.2	Ta.16230.1.S1_x_at	CA602965	-	-	9e+0	At5g67060	HEC1 (HECATE 1)	S.X.	H.G.	Please select
0.83	93.4	TaAffx.106441.1.S1_at	CA718833	-	-	2e+0	At1g17990	12-oxophytodienoate reductase, putative	S.X.	H.G.	Please select
0.77	90.8	Ta.27457.3.S1_x_at	CA729143	-	-	2e-9	At3g09390	MT2A (METALLOTHIONEIN 2A)	S.X.	H.G.	Please select
0.23	29.0	Ta.28629.1.S1_x_at	BE405376	metallothionein-like protein	-	1e+0	At2g42000	plant EC metallothionein-like family 15 protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.1	96.4	GSM246386	SB169_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
4.1	96.4	GSM246394	SB69_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
4.1	96.4	GSM246391	SB62_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
4.0	96.3	GSM143524	Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.0	96.3	GSM246397	SB57_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
3.9	96.1	GSM298055	Leaf tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM246390	SB62_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
3.8	96.0	GSM246387	SB169_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
3.8	96.0	GSM246396	SB57_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
3.8	96.0	GSM246395	SB69_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.68	0	724	Ta.27457.7.S1_x_at	CD861404	-	-	2e-9	At3g09390	MT2A (METALLOTHIONEIN 2A)	C.G.	S.X.	Please select
0.63	0	690	Ta.27457.3.S1_x_at	CA729143	-	-	2e-9	At3g09390	MT2A (METALLOTHIONEIN 2A)	C.G.	S.X.	Please select
0.70	1e-161	569	Ta.27457.4.S1_x_at	BJ254483	-	-	2e-2	At5g02380	MT2B (METALLOTHIONEIN 2B)	C.G.	S.X.	Please select
0.45	2e-117	422	Ta.27457.6.S1_x_at	BJ286831	-	-	1e-4	At5g02380	MT2B (METALLOTHIONEIN 2B)	C.G.	S.X.	Please select
0.43	1e-115	416	Ta.27457.5.S1_x_at	BF200045	-	-	9e-5	At3g09390	MT2A (METALLOTHIONEIN 2A)	C.G.	S.X.	Please select
0.37	1e-114	412	Ta.27457.8.S1_x_at	BJ264173	-	-	6e-12	At3g09390	MT2A (METALLOTHIONEIN 2A)	C.G.	S.X.	Please select
0.53	8e-64	244	TaAffx.106441.1.S1_at	CA718833	-	-	2e+0	At1g17990	12-oxophytodienoate reductase, putative	C.G.	S.X.	Please select
0.48	1e-62	240	Ta.16230.1.S1_x_at	CA602965	-	-	9e+0	At5g67060	HEC1 (HECATE 1)	C.G.	S.X.	Please select
0.46	5e-56	218	Ta.28108.1.S1_at	CA619092	-	-	1e-3	At3g09390	MT2A (METALLOTHIONEIN 2A)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	2e-9	63	Arabidopsis thaliana	At3g09390	820098	MT2A (METALLOTHIONEIN 2A)	metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	2e-16	87	Glycine max	GmaAffx.93164.1.S1_s_at	CF808889	-	-	6e-9	At5g02380	MT2B (METALLOTHIONEIN 2B)	C.G.	S.X.	Please select
0.72	0	658	Hordeum vulgare	Contig402_s_at	Contig402	-	-	3e-7	At3g09390	MT2A (METALLOTHIONEIN 2A)	C.G.	S.X.	Please select
0.23	2e-19	97	Oryza sativa	Os01g0974200	AF017365.1	-	RicMT (Metallothionein-like protein)	2e-2	At3g09390	MT2A (METALLOTHIONEIN 2A)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	2e-12	73	Populus trichocarpa	PtpAffx.1601.1.S1_x_at	AJ779505	hypothetical protein	-	4e-19	At3g09390	MT2A (METALLOTHIONEIN 2A)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	3e-11	67	Vitis vinifera	1615445_at	BQ794327	-	-	5e-3	At5g02380	MT2B (METALLOTHIONEIN 2B)	C.G.	S.X.	Please select
0.11	1e-20	99	Zea mays	Zm.15850.1.S1_at	BM381062	metallothionein-like protein type 2	-	4e-7	At3g09390	MT2A (METALLOTHIONEIN 2A)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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