CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.27414.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 78.6 Ta.27414.1.S1_at BQ801561 - - 1e+1 At5g26890 unknown protein S.X. H.G.
0.57 79.2 Ta.10047.1.S1_s_at AY568295.1 CCAAT-box transcription factor complex WHAP6 /// CCAAT-box transcription factor complex WHAP7 /// CCAAT-box transcription factor complex WHAP9 - 1e-1 At2g40510 40S ribosomal protein S26 (RPS26A) S.X. H.G.
0.14 15.8 TaAffx.65135.1.S1_at BJ259727 - - 2e+0 Atcg00380 - S.X. H.G.
0.14 15.8 TaAffx.143995.17.S1_s_at AY188331 MADS-box protein TaVRT-1 - 1e-3 At5g60910 AGL8 (agamous-like 8) S.X. H.G.
0.04 5.8 TaAffx.122532.1.S1_at CA683492 - - 4e-1 At5g26912 unknown protein S.X. H.G.
0.04 5.8 Ta.16393.1.S1_at CA605569 - - 3e+0 At4g19080 unknown protein S.X. H.G.
0.03 4.7 TaAffx.88122.1.S1_s_at CA615508 - - 5e-1 At4g14490 forkhead-associated domain-containing protein / FHA domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.7 99.5 GSM246386 SB169_Stem_ rep1_at anthesis GSE9767 Genotypic differences in water soluble carbohydrate metabolism in stem
9.2 99.0 GSM246394 SB69_Stem_ rep1_at anthesis GSE9767 Genotypic differences in water soluble carbohydrate metabolism in stem
8.8 98.9 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.9 98.7 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.7 98.7 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.6 98.7 GSM246399 SB3_Stem_ rep2_at anthesis GSE9767 Genotypic differences in water soluble carbohydrate metabolism in stem
7.4 98.6 GSM246384 SB165_Stem_ rep1_at anthesis GSE9767 Genotypic differences in water soluble carbohydrate metabolism in stem
7.2 98.5 GSM246391 SB62_Stem_ rep2_at anthesis GSE9767 Genotypic differences in water soluble carbohydrate metabolism in stem
7.0 98.5 GSM250901 Tc_7dpi_mock_rep1 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.7 98.4 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 7e-17 89 TaAffx.64964.1.S1_at BJ268377 - - 3e-1 At1g73560 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.01 9e-1 36 TaAffx.93953.1.S1_x_at CA671468 - - 2e-1 At3g07670 SET domain-containing protein C.G. S.X.
0.02 9e-1 36 TaAffx.86828.1.S1_x_at CA599972 - - 8e-13 At4g11820 MVA1 C.G. S.X.
0.02 9e-1 36 TaAffx.86828.1.S1_s_at CA599972 - - 8e-13 At4g11820 MVA1 C.G. S.X.
0.02 9e-1 36 TaAffx.78370.1.S1_at CA733489 - - 4e+0 At5g27690 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 9e-1 36 TaAffx.117151.1.S1_at BQ609310 - - 2e-2 At1g23860 RSZP21 (RS-CONTAINING ZINC FINGER PROTEIN 21) C.G. S.X.
0.02 9e-1 36 Ta.19203.1.A1_at BQ237969 - - 1e+0 At4g35660 unknown protein C.G. S.X.
0.02 9e-1 36 Ta.10187.2.S1_a_at BJ257028 - - 4e+0 At5g66170 - C.G. S.X.
0.01 3e+0 34 TaAffx.54075.1.S1_at CA686104 - - 3e-1 At2g33690 late embryogenesis abundant protein, putative / LEA protein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+1 32 Arabidopsis thaliana At5g26890 832747 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown - - - C.G. S.X.
0.02 3e-1 38 Glycine max GmaAffx.38046.1.S1_at BU760708 - - 4e+0 At1g67785 unknown protein C.G. S.X.
0.63 0 1116 Hordeum vulgare Contig11270_at Contig11270 - - 2e-3 At5g12840 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1) C.G. S.X.
0.22 3e-23 111 Oryza sativa Os03g0647600 AK106398.1 - Nf-Y-A subunit 1e+0 At4g17310 unknown protein C.G. S.X.
0.03 1e+0 36 Populus trichocarpa PtpAffx.129522.1.A1_at CV243327 hypothetical protein - 6e-25 At3g20910 NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9) C.G. S.X.
0.02 2e-2 40 Vitis vinifera 1615298_s_at BQ793084 - - 9e-1 At2g43910 thiol methyltransferase, putative C.G. S.X.
0.19 2e-11 69 Zea mays Zm.3773.1.S1_at AY110209.1 hypothetical protein LOC100193094 - 4e+0 At4g18620 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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