Gene omics information

Query gene ID Ta.27319.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8894.4Ta.27319.1.S1_atBT009349.1--2e-57At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)S.X.H.G.
0.3854.7Ta.7295.1.S1_atCK206196--3e-16At4g36940NAPRT1 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 1)S.X.H.G.
0.3549.8Ta.9326.1.S1_x_atCA705658--4e-2At3g47300SELT (SELT-LIKE PROTEIN PRECURSOR)S.X.H.G.
0.3346.9Ta.9326.1.S1_a_atCA705658--4e-2At3g47300SELT (SELT-LIKE PROTEIN PRECURSOR)S.X.H.G.
0.3244.4Ta.1058.2.S1_x_atBJ254771S-adenosylmethionine decarboxylase precursor-3e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)S.X.H.G.
0.3142.7Ta.1601.2.S1_a_atCA706318--9e-7At1g43710emb1075 (embryo defective 1075)S.X.H.G.
0.2939.2Ta.1058.1.S1_x_atCK168726S-adenosylmethionine decarboxylase precursor-5e-12At3g02468CPuORF9 (Conserved peptide upstream open reading frame 9)S.X.H.G.
0.2735.6Ta.1601.1.S1_atCK153610--1e-34At1g43710emb1075 (embryo defective 1075)S.X.H.G.
0.2735.6Ta.1058.2.S1_atBJ254771S-adenosylmethionine decarboxylase precursor-3e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)S.X.H.G.
0.2633.6Ta.1058.3.S1_x_atCN013117S-adenosylmethionine decarboxylase precursor-8e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.395.0GSM111197genotype J15 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
3.294.8GSM111232genotype H8 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
3.094.3GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
2.793.3GSM246397SB57_Stem_ rep2_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stem
2.692.9GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
2.592.5GSM324493Si+ B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.592.5GSM324495Si+ B+ rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.492.0GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.391.5GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat development
2.391.5GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.466e-144511Ta.1312.1.S1_atCK208381--5e-39At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)C.G.S.X.
0.326e-138492TaAffx.109276.1.S1_atCA677632--3e-1At3g45970ATEXLA1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A1)C.G.S.X.
0.288e-48192Ta.2525.1.S1_atCD938347--4e-28At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)C.G.S.X.
0.189e-26119TaAffx.84012.1.S1_x_atCA646373--4e-9At3g29160AKIN11 (Arabidopsis SNF1 kinase homolog 11)C.G.S.X.
0.112e-20101Ta.24092.1.A1_atAJ431365.1SNF1-related protein kinase-2e-57At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)C.G.S.X.
0.232e-20101Ta.24092.1.S1_atAJ431365.1SNF1-related protein kinase-2e-57At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)C.G.S.X.
0.011e+036TaAffx.84135.1.S1_atCA644080--4e+0At5g48500unknown proteinC.G.S.X.
0.021e+036TaAffx.6366.1.S1_atCA687290--2e-1At1g76480unknown proteinC.G.S.X.
0.011e+036Ta.9542.1.S1_x_atBJ252470--1e-3At5g07070CIPK2 (CBL-INTERACTING PROTEIN KINASE 2)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.342e-57224Arabidopsis thalianaAt3g01090821259AKIN10 (Arabidopsis SNF1 kinase homolog 10)encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase---C.G.S.X.
0.313e-57224Glycine maxGma.134.1.S1_atAF128443.1SNF-1-like serine/threonine protein kinase-2e-113At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)C.G.S.X.
0.9102662Hordeum vulgareContig3530_atContig3530--4e-37At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)C.G.S.X.
0.513e-175617Oryza sativaOs05g0530500AK069613.1-OSK13e-84At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)C.G.S.X.
0.352e-33145Populus trichocarpaPtpAffx.213962.1.S1_x_atpmrna27210hypothetical protein-1e-101At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)C.G.S.X.
0.075e-342Vitis vinifera1621473_atCB340930hypothetical protein LOC100254223-2e-4At3g29160AKIN11 (Arabidopsis SNF1 kinase homolog 11)C.G.S.X.
0.533e-153541Zea maysZm.17325.1.A1_atCF627917--2e-51At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage