Gene omics information

Query gene ID Ta.27245.1.S1_s_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6786.3Ta.27245.1.S1_s_atCA646215--6e-5At3g22240unknown proteinS.X.H.G.
0.6081.0Ta.16599.1.S1_atCA647684--1e-4At3g22240unknown proteinS.X.H.G.
0.5072.4Ta.16599.1.S1_x_atCA647684--1e-4At3g22240unknown proteinS.X.H.G.
0.4362.2Ta.8866.1.S1_atCA644219--2e+0At3g22600protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.2735.6Ta.8866.2.S1_atCA652544--6e+0At5g53980ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)S.X.H.G.
0.1719.8Ta.28644.1.S1_atCA663084--1e-3At3g06390integral membrane family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
59.999.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
49.199.9GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat development
48.599.9GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat development
43.099.9GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat development
32.199.9GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat development
24.499.8GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat development
16.199.6GSM250918TcLr34_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.599.1GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat development
8.398.8GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat development
7.698.7GSM250912TcLr34_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.550658Ta.16599.1.S1_atCA647684--1e-4At3g22240unknown proteinC.G.S.X.
0.550658Ta.16599.1.S1_x_atCA647684--1e-4At3g22240unknown proteinC.G.S.X.
0.642e-168591Ta.16599.2.S1_atCA609350--7e-5At3g22240unknown proteinC.G.S.X.
0.191e-21103Ta.16599.3.A1_atCA602078--7e-2At4g08470MAPKKK10C.G.S.X.
0.124e-961Ta.17900.1.S1_atCA625490--3e+0At4g08730unknown proteinC.G.S.X.
0.092e-550Ta.15709.1.A1_atCA486406--7e+0At5g54900ATRBP45A (RNA-binding protein 45A)C.G.S.X.
0.133e-446TaAffx.106686.1.S1_atCA713630--1e-2At2g32190unknown proteinC.G.S.X.
0.153e-446Ta.19368.1.S1_atCA650870--2e-2At2g32190unknown proteinC.G.S.X.
0.143e-446Ta.14129.3.S1_atCA664235--2e-2At2g32190unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.096e-548Arabidopsis thalianaAt3g22240821794unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;P---C.G.S.X.
0.074e-446Glycine maxGma.1636.1.S1_atBU544413--2e-8At3g22240unknown proteinC.G.S.X.
0.462e-74278Hordeum vulgareContig12336_atContig12336--8e-5At3g22240unknown proteinC.G.S.X.
0.242e-21103Oryza sativaOs04g0615200AK063824.1-Conserved hypothetical protein2e+0At1g23360UbiE/COQ5 methyltransferase family proteinC.G.S.X.
0.088e-238Populus trichocarpaPtpAffx.153422.1.A1_atCV257794--2e-1At3g22240unknown proteinC.G.S.X.
0.051e-652Vitis vinifera1613082_atCF205439.1hypothetical protein LOC100244413 /// hypothetical protein LOC100259788-2e-11At3g22240unknown proteinC.G.S.X.
0.212e-961Zea maysZm.15394.1.S1_atBM268179hypothetical protein LOC100194032 /// adhesive/proline-rich protein /// adhesive/proline-rich protein-5e+0At4g08730unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage