Gene omics information

Query gene ID Ta.27161.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2Ta.27161.1.S1_atCK161726--5e-4At3g59380FTA (FARNESYLTRANSFERASE A)S.X.H.G.
0.3651.9TaAffx.112085.1.S1_atCA627212--4e+0At4g15710unknown proteinS.X.H.G.
0.2227.1TaAffx.55497.1.S1_atCA665286--3e-1At5g62610basic helix-loop-helix (bHLH) family proteinS.X.H.G.
0.089.4RPTR-Ta-L36849-1_atRPTR-Ta-L36849-1--0S.X.H.G.
0.078.6TaAffx.110735.1.S1_atCA655118--3e-1At5g51210OLEO3 (OLEOSIN3)S.X.H.G.
0.056.7TaAffx.110731.1.S1_atCA655161--2e+1At5g55570unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
37.099.9GSM250918TcLr34_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
34.699.9GSM246390SB62_Stem_ rep1_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stem
25.199.8GSM143501Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
24.599.8GSM138210genotype B65 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
12.699.4GSM250909TcLr1_7dpi_mock_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.899.3GSM138154genotype H5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.399.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
10.399.2GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
9.799.1GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
8.398.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription survey
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.142e-43178Ta.13125.1.S1_atCD490995--2e+0At3g59380FTA (FARNESYLTRANSFERASE A)C.G.S.X.
0.022e-965Ta.12439.1.A1_atBQ172338--2e+0At1g05540unknown proteinC.G.S.X.
0.013e-861Ta.8700.1.S1_atBQ162247--8e+0At4g13870WRNEXO (WERNER SYNDROME-LIKE EXONUCLEASE)C.G.S.X.
0.023e-861Ta.7318.1.S1_a_atBJ250137--2e+0At3g22110PAC1C.G.S.X.
0.023e-861Ta.7318.1.S1_atBJ250137--2e+0At3g22110PAC1C.G.S.X.
0.025e-757TaAffx.97466.1.A1_atBQ169112--3e+0At2g34530unknown proteinC.G.S.X.
0.025e-757TaAffx.97466.1.A1_x_atBQ169112--3e+0At2g34530unknown proteinC.G.S.X.
0.015e-757TaAffx.44608.1.A1_atCK208309--1e+0At1g50220unknown proteinC.G.S.X.
0.015e-757Ta.11585.1.S1_atBQ170401--5e+0At5g35890beta-galactosidaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-448Arabidopsis thalianaAt3g59380825107FTA (FARNESYLTRANSFERASE A)Encodes the alpha-subunit shared between protein farnesyltransferase and protein geranylgeranyltransferase-I. Involved in protein prenylation: covalent attachment of the C-15 isoprene farnesyl or the C-20 isoprene geranylgeranyl groups to the C-terminal end of some proteins. Involved in shoot and flower meristem homeostasis, and response to ABA and drought. Also regulates leaf cell shape. Mutant is epistatic to era1.---C.G.S.X.
0.025e-552Glycine maxGmaAffx.56889.3.S1_atAW185190--6e-10At3g59380FTA (FARNESYLTRANSFERASE A)C.G.S.X.
0.5102282Hordeum vulgareContig12731_atContig12731--2e-4At3g59380FTA (FARNESYLTRANSFERASE A)C.G.S.X.
0.310757Oryza sativaOs09g0514400AK060892.1-Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (EC2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alphasubunit) (Ras proteins prenyltransferase alpha)(FTase-alpha) (Type I protein geranyl-geranyltransferasealpha subunit) (GGTase-I-alpha)7e-4At3g59380FTA (FARNESYLTRANSFERASE A)C.G.S.X.
0.031e-244Populus trichocarpaPtpAffx.61544.1.A1_atCA931045hypothetical protein-4e-19At3g59380FTA (FARNESYLTRANSFERASE A)C.G.S.X.
0.012e+034Vitis vinifera1622068_atCA816776hypothetical protein LOC100252985-7e-3At3g50780-C.G.S.X.
0.112e-26121Zea maysZm.12921.1.A1_atCA401711hypothetical protein LOC100273635-6e+0At5g27290unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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