Gene omics information

Query gene ID	Ta.27101.7.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.27101.7.S1_x_at	BJ221566	-	-	9e-45	At1g09200	histone H3	S.X.	H.G.	Please select
0.81	92.4	Ta.7378.22.S1_x_at	BJ214626	Protein H2B-6 /// Protein H2B-8 /// Histone H2B	-	9e-21	At1g07790	HTB1	S.X.	H.G.	Please select
0.79	91.3	Ta.10329.43.S1_x_at	BJ277068	-	-	9e-20	At5g59970	histone H4	S.X.	H.G.	Please select
0.79	91.3	Ta.7378.28.S1_x_at	BJ229643	Protein H2B-8	-	3e-14	At1g07790	HTB1	S.X.	H.G.	Please select
0.78	91.1	Ta.7378.8.S1_x_at	CK216925	Protein H2B-8	-	1e-16	At1g07790	HTB1	S.X.	H.G.	Please select
0.78	91.1	Ta.27657.11.S1_x_at	BJ318011	-	-	7e-12	At1g08880	H2AXA	S.X.	H.G.	Please select
0.78	91.1	Ta.7378.22.S1_at	BJ214626	Protein H2B-6 /// Protein H2B-8 /// Histone H2B	-	9e-21	At1g07790	HTB1	S.X.	H.G.	Please select
0.77	90.8	Ta.7378.25.S1_at	BJ221397	Protein H2B-8	-	1e-22	At1g07790	HTB1	S.X.	H.G.	Please select
0.74	89.4	Ta.16950.1.S1_at	CA615793	-	-	3e+0	At5g23280	TCP family transcription factor, putative	S.X.	H.G.	Please select
0.73	89.1	Ta.7378.30.S1_x_at	BJ219629	Protein H2B-6	-	3e-20	At1g07790	HTB1	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.2	97.5	GSM139915	Anther pre-meiosis rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
4.8	97.2	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
4.4	96.8	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.92	0	1106	Ta.27101.7.S1_at	BJ221566	-	-	9e-45	At1g09200	histone H3	C.G.	S.X.	Please select
0.52	3e-177	621	Ta.27101.5.S1_x_at	BJ309242	-	-	3e-45	At1g09200	histone H3	C.G.	S.X.	Please select
0.50	1e-173	609	Ta.27101.3.S1_x_at	CK209895	-	-	4e-38	At1g09200	histone H3	C.G.	S.X.	Please select
0.50	1e-173	609	Ta.27101.3.S1_at	CK209895	-	-	4e-38	At1g09200	histone H3	C.G.	S.X.	Please select
0.49	1e-158	559	Ta.27101.2.S1_at	CD868502	-	-	5e-19	At4g40040	histone H3.2	C.G.	S.X.	Please select
0.59	2e-154	545	Ta.28495.1.S1_x_at	BJ207229	-	-	2e-33	At1g09200	histone H3	C.G.	S.X.	Please select
0.50	2e-123	442	TaAffx.113263.6.S1_at	BE213282	-	-	3e-26	At1g09200	histone H3	C.G.	S.X.	Please select
0.55	6e-123	440	Ta.14641.1.S1_at	BJ214272	-	-	2e-9	At5g10980	histone H3	C.G.	S.X.	Please select
0.42	6e-120	430	Ta.27101.10.S1_x_at	AJ613323	-	-	1e-26	At5g10980	histone H3	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.57	9e-45	180	Arabidopsis thaliana	At1g09200	837440	histone H3	F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.53	2e-83	309	Glycine max	PsAffx.C1000261_at	PsAffx.C1000261	-	-	1e-15	At5g10980	histone H3	C.G.	S.X.	Please select
0.74	0	753	Hordeum vulgare	Contig94_at	Contig94	-	-	4e-47	At1g09200	histone H3	C.G.	S.X.	Please select
0.59	1e-128	460	Oryza sativa	Os11g0155900	U77296.1	-	Histone H3	2e-57	At1g09200	histone H3	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.38	4e-20	99	Populus trichocarpa	PtpAffx.6315.2.S1_a_at	CV261215	histone H3	-	1e-47	At4g40030	histone H3.2	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.52	3e-51	200	Vitis vinifera	1614219_at	CF413920	similar to predicted protein	-	3e-47	At5g10400	histone H3	C.G.	S.X.	Please select
0.55	2e-151	533	Zea mays	Zm.16281.1.S1_at	BM378604	-	-	2e-18	At5g10980	histone H3	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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