Gene omics information

Query gene ID	Ta.27027.1.S1_s_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	74.9	Ta.27027.1.S1_s_at	CA596068	-	-	9e-34	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	S.X.	H.G.	Please select
0.86	94.1	Ta.5504.2.S1_at	CA629406	-	-	2e+1	At4g24130	unknown protein	S.X.	H.G.	Please select
0.83	93.4	Ta.5504.1.S1_x_at	CK211141	-	-	7e+0	At1g01750	ADF11 (ACTIN DEPOLYMERIZING FACTOR 11)	S.X.	H.G.	Please select
0.80	92.2	Ta.7871.3.S1_a_at	CA636480	-	-	7e-1	At1g70470	unknown protein	S.X.	H.G.	Please select
0.80	92.2	Ta.7871.1.S1_x_at	BQ752923	-	-	1e-39	At2g41540	GPDHC1	S.X.	H.G.	Please select
0.67	86.3	Ta.7871.3.S1_at	CA636480	-	-	7e-1	At1g70470	unknown protein	S.X.	H.G.	Please select
0.61	82.0	Ta.7871.2.S1_a_at	CA708151	-	-	7e-8	At2g41540	GPDHC1	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
20.7	99.7	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
15.2	99.6	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
13.3	99.5	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
12.6	99.4	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.5	99.2	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM111237	genotype F38b developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.5	95.4	GSM138183	genotype A10 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM138166	genotype G30 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.2	94.8	GSM314282	tissue type: 3-5 DAP caryopsis - rep2	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	2111	Ta.27027.1.A1_at	BT008918.1	-	-	9e-34	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	C.G.	S.X.	Please select
1.00	0	2111	Ta.27027.1.S1_at	CA596068	-	-	9e-34	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	C.G.	S.X.	Please select
0.57	0	1394	Ta.19055.1.A1_at	CK205684	-	-	8e-23	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	C.G.	S.X.	Please select
0.16	5e-23	109	Ta.30533.1.A1_at	CK194740	-	-	9e-5	At1g78980	SRF5 (STRUBBELIG-RECEPTOR FAMILY 5)	C.G.	S.X.	Please select
0.08	5e-17	89	TaAffx.128418.42.S1_at	BJ219079	-	-	4e+0	At5g24920	AtGDU5 (Arabidopsis thaliana GLUTAMINE DUMPER 5)	C.G.	S.X.	Please select
0.04	2e-3	44	TaAffx.7753.1.S1_at	CA651143	-	-	4e-3	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	C.G.	S.X.	Please select
0.04	2e-3	44	Ta.7448.1.A1_at	BJ320729	-	-	1e-3	At1g06700	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.03	1e-2	42	TaAffx.9571.1.S1_at	CA594679	-	-	9e+0	At5g65090	BST1 (BRISTLED 1)	C.G.	S.X.	Please select
0.02	1e-2	42	TaAffx.9532.1.S1_at	CA596838	-	-	2e+1	At2g40233	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	9e-34	145	Arabidopsis thaliana	At4g22130	828302	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	F:in 6 functions;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.38	6e-17	89	Glycine max	GmaAffx.36693.1.S1_at	BG881453	-	-	2e-70	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	C.G.	S.X.	Please select
0.72	0	1756	Hordeum vulgare	Contig6843_at	Contig6843	-	-	2e-32	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	C.G.	S.X.	Please select
0.39	0	769	Oryza sativa	Os02g0190500	AK111710.1	-	Leucine-rich repeat transmembrane protein kinase 2	2e-18	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.39	2e-53	210	Populus trichocarpa	PtpAffx.209626.1.S1_at	pmrna19021	hypothetical protein	-	3e-113	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.23	4e-24	111	Vitis vinifera	1607816_at	CF216068	hypothetical protein LOC100248686	-	1e-28	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	C.G.	S.X.	Please select
0.05	2e-2	40	Zea mays	Zm.11939.1.A1_at	CF624620	-	-	7e-21	At3g14350	SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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