Gene omics information

Query gene ID	Ta.26942.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.76	90.1	Ta.26942.1.S1_at	CD491274	-	-	8e-46	At5g59300	UBC7 (UBIQUITIN CARRIER PROTEIN 7)	S.X.	H.G.	Please select
0.55	76.8	TaAffx.105981.1.S1_x_at	CA727065	-	-	3e-1	At4g11870	unknown protein	S.X.	H.G.	Please select
0.48	69.0	TaAffx.105503.1.S1_at	CA733364	-	-	1e+0	At5g44200	CBP20 (CAP-BINDING PROTEIN 20)	S.X.	H.G.	Please select
0.47	67.9	TaAffx.24833.1.S1_at	CA711224	-	-	7e-1	At1g68945	unknown protein	S.X.	H.G.	Please select
0.40	58.4	TaAffx.83840.1.S1_at	CA649783	-	-	4e+0	At1g28170	sulfotransferase family protein	S.X.	H.G.	Please select
0.33	46.9	Ta.11247.1.A1_at	BJ251293	-	-	2e-8	At1g33140	PGY2 (PIGGYBACK2)	S.X.	H.G.	Please select
0.32	44.4	TaAffx.23743.1.S1_at	CA731059	-	-	3e-1	At2g28790	osmotin-like protein, putative	S.X.	H.G.	Please select
0.31	42.7	TaAffx.25411.1.S1_at	CA700489	-	-	4e+0	At4g35320	unknown protein	S.X.	H.G.	Please select
0.30	40.9	TaAffx.57555.1.S1_at	CA618738	-	-	2e+1	At5g67600	unknown protein	S.X.	H.G.	Please select
0.22	27.1	Ta.26652.1.A1_at	CD491481	-	-	1e-3	At1g36050	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
29.4	99.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
15.5	99.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
14.9	99.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.2	98.5	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
7.1	98.5	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.0	98.5	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.6	98.3	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.2	98.1	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.4	97.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.68	2e-173	609	TaAffx.112236.1.S1_x_at	CA625687	-	-	3e-10	At5g59300	UBC7 (UBIQUITIN CARRIER PROTEIN 7)	C.G.	S.X.	Please select
0.68	2e-173	609	TaAffx.112236.1.S1_s_at	CA625687	-	-	3e-10	At5g59300	UBC7 (UBIQUITIN CARRIER PROTEIN 7)	C.G.	S.X.	Please select
0.47	7e-148	523	Ta.14433.1.S1_at	BJ218583	-	-	1e-35	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	C.G.	S.X.	Please select
0.38	3e-110	398	Ta.28708.1.S1_at	BJ228966	-	-	3e-18	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	C.G.	S.X.	Please select
0.13	2e-6	54	TaAffx.108530.1.S1_at	CA687348	-	-	1e+1	At5g18930	BUD2 (BUSHY AND DWARF 2)	C.G.	S.X.	Please select
0.04	5e-1	36	TaAffx.84495.1.S1_at	CA635650	-	-	1e+0	At1g23690	unknown protein	C.G.	S.X.	Please select
0.02	5e-1	36	TaAffx.114922.1.S1_at	CA726912	-	-	7e-2	At5g17650	glycine/proline-rich protein	C.G.	S.X.	Please select
0.02	2e+0	34	TaAffx.9502.1.S1_at	BJ268925	-	-	2e+0	At1g02550	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.02	2e+0	34	TaAffx.89713.1.S1_at	CA639990	-	-	4e+0	At1g68905	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.37	8e-46	184	Arabidopsis thaliana	At5g59300	836048	UBC7 (UBIQUITIN CARRIER PROTEIN 7)	ubiquitin conjugating enzyme E2	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.26	1e-26	121	Glycine max	Gma.3757.1.S1_at	CD405183	-	-	6e-53	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	C.G.	S.X.	Please select
0.53	5e-144	510	Hordeum vulgare	Contig3462_at	Contig3462	-	-	5e-35	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	C.G.	S.X.	Please select
0.47	3e-170	599	Oryza sativa	Os05g0460200	AK098861.1	-	Ubiquitin carrier protein	4e-36	At5g59300	UBC7 (UBIQUITIN CARRIER PROTEIN 7)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.25	1e-20	101	Populus trichocarpa	Ptp.1266.1.S1_a_at	CV252807	hypothetical protein	-	2e-31	At3g55380	UBC14 (ubiquitin-conjugating enzyme 14)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.26	3e-42	171	Vitis vinifera	1608461_at	BQ797145	hypothetical protein LOC100264959	-	6e-64	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	C.G.	S.X.	Please select
0.82	0	1078	Zea mays	Zm.16785.1.A1_at	AF032468.1	hypothetical protein LOC100272466	-	7e-37	At5g59300	UBC7 (UBIQUITIN CARRIER PROTEIN 7)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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