Gene omics information

Query gene ID	Ta.26657.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.94	98.9	Ta.26657.1.A1_at	CD491487	-	-	3e-1	At4g33610	glycine-rich protein	S.X.	H.G.	Please select
0.66	84.1	TaAffx.109026.1.S1_at	CA663686	-	-	9e-1	At4g35165	unknown protein	S.X.	H.G.	Please select
0.64	83.6	TaAffx.85713.1.S1_at	CA620256	-	-	4e+0	At2g32710	KRP4	S.X.	H.G.	Please select
0.59	79.8	TaAffx.51913.1.S1_x_at	CA716536	-	-	8e-1	At5g56110	ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)	S.X.	H.G.	Please select
0.59	79.8	TaAffx.105943.1.S1_at	CA727514	-	-	2e+1	At5g07470	PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3)	S.X.	H.G.	Please select
0.57	79.2	TaAffx.110614.4.S1_at	CA605907	-	-	3e-1	At4g14630	GLP9 (GERMIN-LIKE PROTEIN 9)	S.X.	H.G.	Please select
0.54	75.5	TaAffx.105981.1.S1_at	CA727065	-	-	3e-1	At4g11870	unknown protein	S.X.	H.G.	Please select
0.53	74.9	TaAffx.112720.1.S1_at	CA621571	-	-	7e-5	At5g39580	peroxidase, putative	S.X.	H.G.	Please select
0.53	74.9	TaAffx.95641.1.S1_at	CA620605	-	-	3e-7	At5g23950	C2 domain-containing protein	S.X.	H.G.	Please select
0.53	74.9	Ta.19591.2.A1_a_at	CA651113	-	-	4e+0	At5g11500	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
64.4	99.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
25.5	99.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
13.9	99.5	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
8.2	98.8	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
8.2	98.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.1	98.8	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.6	98.3	GSM111208	genotype F36 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.3	98.2	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.9	98.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.28	5e-68	258	TaAffx.58580.1.S1_x_at	CA616795	-	-	1e+0	At1g64710	alcohol dehydrogenase, putative	C.G.	S.X.	Please select
0.27	3e-60	232	Ta.30799.1.S1_at	CA663961	-	-	1e-1	At5g54580	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.18	3e-14	79	Ta.30799.3.S1_a_at	CA720672	-	-	6e-2	At5g54580	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.18	3e-14	79	Ta.30799.3.S1_x_at	CA720672	-	-	6e-2	At5g54580	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.05	4e-4	46	TaAffx.33684.1.S1_at	CA604592	-	-	2e+0	At3g09240	protein kinase-related	C.G.	S.X.	Please select
0.02	4e-1	36	TaAffx.94898.2.S1_s_at	CK213057	-	-	1e-11	At2g34770	FAH1 (FATTY ACID HYDROXYLASE 1)	C.G.	S.X.	Please select
0.02	1e+0	34	TaAffx.91465.1.S1_at	BJ322681	-	-	7e-3	At1g27390	TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2)	C.G.	S.X.	Please select
0.02	1e+0	34	TaAffx.113972.1.S1_at	CA593904	-	-	2e-12	At3g13690	protein kinase family protein	C.G.	S.X.	Please select
0.03	1e+0	34	Ta.9392.3.S1_at	CA681486	-	-	4e+0	At3g21730	dihydroneopterin aldolase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-1	36	Arabidopsis thaliana	At4g33610	829501	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMPOVF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-1	36	Glycine max	Gma.7350.1.S1_at	BU547120	-	-	3e-5	At5g54580	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.27	2e-56	218	Hordeum vulgare	Contig8338_at	Contig8338	-	-	2e+0	At4g33610	glycine-rich protein	C.G.	S.X.	Please select
0.38	3e-55	216	Oryza sativa	Os08g0139000	AK070704.1	-	RNA-binding glycine rich protein (RGP-2)	1e+0	At4g33610	glycine-rich protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	2e-9	63	Populus trichocarpa	PtpAffx.1476.2.A1_at	CV245573	hypothetical protein	-	5e-4	At5g54580	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e+0	30	Vitis vinifera	1619494_at	CA810687	hypothetical protein LOC100258992	-	1e+0	At1g01380	ETC1 (ENHANCER OF TRY AND CPC 1)	C.G.	S.X.	Please select
0.51	1e-109	395	Zea mays	Zm.2397.1.A1_at	AY104240.1	nucleolin	-	2e+0	At1g64710	alcohol dehydrogenase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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