Gene omics information

Query gene ID	Ta.26655.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.97	99.6	Ta.26655.1.S1_at	CD491484	-	-	4e-1	Atmg00740	-	S.X.	H.G.	Please select
0.59	79.8	TaAffx.116081.1.S1_x_at	CA731162	-	-	1e+0	At5g07540	GRP16 (GLYCINE-RICH PROTEIN 16)	S.X.	H.G.	Please select
0.45	65.2	TaAffx.30193.1.S1_s_at	CA627226	-	-	4e+0	At1g62060	unknown protein	S.X.	H.G.	Please select
0.41	59.6	TaAffx.105993.1.S1_at	CA726866	-	-	3e-1	At1g25054	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	S.X.	H.G.	Please select
0.40	58.4	TaAffx.87047.1.S1_at	CA596746	-	-	3e-1	At5g13890	unknown protein	S.X.	H.G.	Please select
0.39	56.1	TaAffx.59462.1.S1_at	CA600120	-	-	7e-2	At2g42040	-	S.X.	H.G.	Please select
0.39	56.1	TaAffx.79532.1.S1_at	CA713411	-	-	3e+1	At4g02360	unknown protein	S.X.	H.G.	Please select
0.39	56.1	TaAffx.54172.1.S1_at	CA684890	-	-	2e+1	At3g47980	integral membrane HPP family protein	S.X.	H.G.	Please select
0.39	56.1	TaAffx.85941.1.S1_at	CA618291	-	-	2e+1	At5g23760	heavy-metal-associated domain-containing protein	S.X.	H.G.	Please select
0.39	56.1	TaAffx.56232.1.S1_at	CA655525	-	-	4e+0	At4g39970	haloacid dehalogenase-like hydrolase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.1	99.6	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
16.5	99.6	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
13.4	99.5	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
10.7	99.2	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.2	99.0	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.3	98.8	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.0	98.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.9	98.7	GSM143525	Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.6	98.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.4	98.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.39	2e-49	196	Ta.641.1.S1_at	BG906659	-	-	7e-4	At1g19660	wound-responsive family protein	C.G.	S.X.	Please select
0.18	2e-6	54	Ta.641.2.S1_at	BJ257632	-	-	3e-1	At2g20616	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	36	Ta.502.3.A1_at	BG909010	-	-	8e+0	At5g13830	FtsJ-like methyltransferase family protein	C.G.	S.X.	Please select
0.02	2e+0	34	TaAffx.57601.1.S1_at	CA626675	-	-	4e+0	At3g53250	auxin-responsive family protein	C.G.	S.X.	Please select
0.02	2e+0	34	TaAffx.48306.1.S1_at	CA599737	-	-	3e-5	At2g16405	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.02	7e+0	32	TaAffx.82878.1.S1_at	CA665557	-	-	4e+0	At5g50361	unknown protein	C.G.	S.X.	Please select
0.03	7e+0	32	TaAffx.50030.2.S1_at	CA746375	-	-	2e-1	At5g49350	unknown protein	C.G.	S.X.	Please select
0.02	7e+0	32	TaAffx.50030.1.S1_at	CA745474	-	-	4e+0	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	C.G.	S.X.	Please select
0.02	7e+0	32	TaAffx.16125.1.S1_at	CD492066	-	-	1e-4	At2g27690	CYP94C1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e-1	36	Arabidopsis thaliana	Atmg00740	-	-	hypothetical protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	6e-1	36	Glycine max	GmaAffx.3619.1.S1_at	BQ785103	-	-	5e-76	At1g75380	wound-responsive protein-related	C.G.	S.X.	Please select
0.39	7e-69	260	Hordeum vulgare	Contig4701_at	Contig4701	-	-	2e-1	At1g19660	wound-responsive family protein	C.G.	S.X.	Please select
0.44	9e-121	434	Oryza sativa	Os01g0702000	AK065414.1	-	Conserved hypothetical protein	4e-5	At1g75380	wound-responsive protein-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	9e+0	32	Populus trichocarpa	PtpAffx.60650.1.S1_at	CK105155	-	-	4e+0	At5g23600	tRNA 2'phosphotransferase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	5e-1	34	Vitis vinifera	1621693_at	BQ792185	hypothetical protein LOC100248963	-	5e-73	At1g75380	wound-responsive protein-related	C.G.	S.X.	Please select
0.60	3e-163	573	Zea mays	Zm.3569.1.A1_at	CO518726	hypothetical protein LOC100280101	-	5e+0	At3g55600	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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