CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.26188.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 86.3 Ta.26188.1.A1_at CD452630 - - 6e-1 At3g02720 DJ-1 family protein / protease-related S.X. H.G.
0.74 89.4 TaAffx.63920.1.A1_x_at BQ162587 - - 2e+0 At2g02880 mucin-related S.X. H.G.
0.67 86.3 TaAffx.63920.1.A1_at BQ162587 - - 2e+0 At2g02880 mucin-related S.X. H.G.
0.67 86.3 Ta.8896.2.S1_a_at CA639810 - - 1e-1 At1g15970 methyladenine glycosylase family protein S.X. H.G.
0.64 83.6 Ta.25946.1.A1_at CD454681 - - 5e+0 At5g44585 unknown protein S.X. H.G.
0.58 79.2 Ta.8896.2.S1_x_at CA639810 - - 1e-1 At1g15970 methyladenine glycosylase family protein S.X. H.G.
0.55 76.8 Ta.8896.1.S1_x_at CK153405 - - 1e-1 At1g15970 methyladenine glycosylase family protein S.X. H.G.
0.55 76.8 Ta.4779.1.S1_at BJ271542 - - 9e-1 At5g20920 EIF2 BETA S.X. H.G.
0.39 56.1 Ta.9451.2.S1_x_at BQ838583 - - 3e-1 At4g36430 peroxidase, putative S.X. H.G.
0.39 56.1 Ta.3596.2.A1_x_at BJ266692 - - 3e-10 At5g15490 UDP-glucose 6-dehydrogenase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
59.1 99.9 GSM314260 tissue type: seedling, root - rep1 GSE12508 Transcription patterns during wheat development
43.2 99.9 GSM314254 tissue type: germinating seed, root - rep1 GSE12508 Transcription patterns during wheat development
31.3 99.9 GSM314261 tissue type: seedling, root - rep2 GSE12508 Transcription patterns during wheat development
24.8 99.8 GSM314256 tissue type: germinating seed, root - rep3 GSE12508 Transcription patterns during wheat development
15.9 99.6 GSM314262 tissue type: seedling, root - rep3 GSE12508 Transcription patterns during wheat development
13.1 99.4 GSM298076 Crown tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
12.7 99.4 GSM314255 tissue type: germinating seed, root - rep2 GSE12508 Transcription patterns during wheat development
10.8 99.2 GSM298073 Crown tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
9.9 99.1 GSM298074 Crown tissue of Paragon at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
7.5 98.6 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 4e-5 50 Ta.21293.1.S1_at CD913155 - - 2e+0 At5g59000 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 1e-2 42 TaAffx.131248.1.S1_at CD927472 - - 5e+0 At3g50190 unknown protein C.G. S.X.
0.06 1e-2 42 Ta.9283.1.S1_at CD865580 - - 3e+0 At1g06640 2-oxoglutarate-dependent dioxygenase, putative C.G. S.X.
0.02 1e-2 42 Ta.11612.1.A1_at BQ170458 - - 9e-2 At1g52180 major intrinsic family protein / MIP family protein C.G. S.X.
0.05 4e-2 40 TaAffx.56615.1.S1_at CA647761 - - 7e-1 At1g28050 zinc finger (B-box type) family protein C.G. S.X.
0.02 4e-2 40 TaAffx.39904.1.A1_at CK213067 - - 1e-1 At2g19830 SNF7.2 C.G. S.X.
0.05 4e-2 40 TaAffx.29187.1.S1_at CA648449 - - 2e+1 At5g64080 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.06 4e-2 40 Ta.4137.2.A1_at CA682472 - - 3e-1 At1g68550 AP2 domain-containing transcription factor, putative C.G. S.X.
0.02 4e-2 40 Ta.30586.1.S1_s_at CA680631 - - 3e-12 At1g18440 peptidyl-tRNA hydrolase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-1 36 Arabidopsis thaliana At3g02720 820875 DJ-1 family protein / protease-related F:hydrolase activity, acting on glycosyl bonds;P:biological_process unknown;C:cellular_component unknown;BOAPMF - - - C.G. S.X.
0.02 8e-1 36 Glycine max PsAffx.psZS008xI20f_at PsAffx.psZS008xI20f - - 3e-1 At4g28280 unknown protein C.G. S.X.
0.12 6e-21 101 Hordeum vulgare Contig14510_at Contig14510 - - 3e+0 At2g46750 FAD-binding domain-containing protein C.G. S.X.
0.44 4e-133 476 Oryza sativa Os03g0563100 AK109527.1 - Plant-specific FAD-dependent oxidoreductase familyprotein 4e+0 At1g20823 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 1e+1 32 Populus trichocarpa PtpAffx.43822.1.A1_at CV257217 - - 4e+0 At4g10925 F-box family protein C.G. S.X.
0.02 1e+1 30 Vitis vinifera 1615302_at CF414670 - - 7e-1 At3g44716 unknown protein C.G. S.X.
0.02 2e-2 40 Zea mays ZmAffx.646.1.A1_at AI715074 - - 3e-1 At1g76180 ERD14 (EARLY RESPONSE TO DEHYDRATION 14) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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