Gene omics information

Query gene ID	Ta.26169.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.85	93.8	Ta.26169.1.A1_at	CD452458	-	-	1e+0	At1g78170	unknown protein	S.X.	H.G.	Please select
0.69	86.9	Ta.14344.1.S1_at	BU101208	-	-	1e+0	At2g44520	COX10 (cytochrome c oxidase 10)	S.X.	H.G.	Please select
0.67	86.3	Ta.16838.1.S1_s_at	CA613525	-	-	2e+0	At4g21865	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.21050.1.S1_at	CA603437	-	-	1e-2	At4g26010	peroxidase, putative	S.X.	H.G.	Please select
0.66	84.1	Ta.12850.1.A1_at	CA643781	-	-	6e-1	At1g31170	SRX (SULFIREDOXIN)	S.X.	H.G.	Please select
0.65	83.9	Ta.12879.1.S1_at	CD490901	-	-	1e+0	At1g07750	cupin family protein	S.X.	H.G.	Please select
0.63	83.1	Ta.5252.2.S1_s_at	CA639061	-	-	4e+0	Atmg00480	-	S.X.	H.G.	Please select
0.63	83.1	Ta.16217.1.S1_at	CA602728	-	-	2e+0	At3g22090	unknown protein	S.X.	H.G.	Please select
0.58	79.2	Ta.16155.1.A1_at	CD452958	-	-	5e+0	At1g71695	peroxidase 12 (PER12) (P12) (PRXR6)	S.X.	H.G.	Please select
0.58	79.2	Ta.8897.1.A1_at	BQ162591	-	-	4e+0	At2g12405	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
84.9	100.0	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
64.3	99.9	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
63.3	99.9	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
55.1	99.9	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
42.3	99.9	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
15.3	99.6	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
7.8	98.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
1.5	84.9	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.28	3e-29	129	TaAffx.31973.1.S1_at	CA604179	-	-	4e+0	At1g12423	unknown protein	C.G.	S.X.	Please select
0.23	1e-16	87	TaAffx.56333.1.S1_at	CA653991	-	-	1e+1	At5g24860	FPF1 (FLOWERING PROMOTING FACTOR 1)	C.G.	S.X.	Please select
0.11	3e-11	69	Ta.19504.1.S1_at	CA652768	-	-	4e+0	At1g57780	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.11	3e-5	50	TaAffx.59075.1.S1_at	CA643823	-	-	2e-1	At4g29650	cytidine deaminase 4 (CDA4) (desH) / cytidine aminohydrolase	C.G.	S.X.	Please select
0.07	2e-2	40	Ta.8784.1.S1_at	CD452671	-	-	3e+0	At3g19430	late embryogenesis abundant protein-related / LEA protein-related	C.G.	S.X.	Please select
0.03	4e-1	36	TaAffx.119814.1.S1_at	CA712498	-	-	4e+0	At3g46300	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.12101.3.S1_at	BJ297732	-	-	5e-6	At1g07920	elongation factor 1-alpha / EF-1-alpha	C.G.	S.X.	Please select
0.03	2e+0	34	Ta.6014.1.A1_at	BJ294422	-	-	1e+0	At2g22000	PROPEP6 (Elicitor peptide 6 precursor)	C.G.	S.X.	Please select
0.02	2e+0	34	Ta.10569.1.A1_at	CK208173	-	-	1e+0	At5g18590	kelch repeat-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	34	Arabidopsis thaliana	At1g78170	844153	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e-1	38	Glycine max	GmaAffx.58234.1.S1_s_at	BE583675	-	-	9e+0	At4g29350	PFN2 (PROFILIN 2)	C.G.	S.X.	Please select
0.61	7e-109	393	Hordeum vulgare	EBro08_SQ007_P13_at	EBro08_SQ007_P13	-	-	4e+0	At2g22060	-	C.G.	S.X.	Please select
0.33	2e-38	161	Oryza sativa	Os01g0968400	BE039193	-	Root cap family protein	1e-1	At3g19430	late embryogenesis abundant protein-related / LEA protein-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	8e+0	32	Populus trichocarpa	PtpAffx.94059.1.S1_at	CX168152	-	-	4e+0	At4g16240	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e-1	34	Vitis vinifera	1617339_at	CF207748	-	-	1e+0	At4g09760	choline kinase, putative	C.G.	S.X.	Please select
0.33	6e-38	157	Zea mays	Zm.9635.1.A1_at	BM334297	-	-	2e+1	At5g55940	emb2731 (embryo defective 2731)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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