Gene omics information

Query gene ID Ta.2593.2.S1_x_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7389.1Ta.2593.2.S1_x_atBQ169061--1e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)S.X.H.G.
0.6182.0Ta.2593.2.S1_atBQ169061--1e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)S.X.H.G.
0.4869.0TaAffx.131691.1.S1_atBJ320808--5e+0At2g21150XCT (XAP5 CIRCADIAN TIMEKEEPER)S.X.H.G.
0.4464.5Ta.4881.2.A1_a_atBJ215436--1e+0At5g06450nucleic acid bindingS.X.H.G.
0.2939.2TaAffx.4526.2.S1_atCA739015--1e+0Atmg00920-S.X.H.G.
0.2939.2Ta.12758.1.S1_x_atBM136354--2e+0At5g56980unknown proteinS.X.H.G.
0.1821.0Ta.9887.3.A1_x_atBJ239587--3e-2At5g5729060S acidic ribosomal protein P3 (RPP3B)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.797.1GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat development
4.296.6GSM314271tissue type: immature inflorescence - rep3GSE12508Transcription patterns during wheat development
4.196.4GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat development
3.896.0GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat development
3.795.8GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
3.595.4GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat development
3.495.2GSM298088Crown tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
3.395.0GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
3.294.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
3.094.3GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat development
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9704982Ta.2593.2.S1_atBQ169061--1e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.260763Ta.2593.3.S1_x_atCA665053--4e-1At4g23980ARF9 (AUXIN RESPONSE FACTOR 9)C.G.S.X.
0.340682TaAffx.89243.1.S1_atAL828593auxin response factor 2-2e-3At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.381e-139498Ta.2593.1.S1_atBJ307314--2e-10At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.112e-46188TaAffx.110095.1.S1_atCA664075--4e+0At4g16140proline-rich family proteinC.G.S.X.
0.104e-26121TaAffx.51314.1.S1_atCA727605--3e-1At5g07680ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80)C.G.S.X.
0.104e-26121TaAffx.51314.1.S1_x_atCA727605--3e-1At5g07680ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80)C.G.S.X.
0.065e-22107TaAffx.8950.1.S1_atCA617565--5e-2At3g04730IAA16C.G.S.X.
0.048e-1893Ta.4027.2.S1_atBJ257188--7e-3At2g46530ARF11 (AUXIN RESPONSE FACTOR 11)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.131e-25119Arabidopsis thalianaAt5g62000836321ARF2 (AUXIN RESPONSE FACTOR 2)Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.---C.G.S.X.
0.162e-34149Glycine maxGma.2563.1.S1_a_atBQ742867--2e-61At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.8502012Hordeum vulgareContig1664_atContig1664--5e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.620975Oryza sativaOs01g0927600AK072309.1-AUX/IAA protein family protein6e-28At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.137e-25117Populus trichocarpaPtpAffx.210693.1.S1_atpmrna20965hypothetical protein-4e-125At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.053e-1169Vitis vinifera1611882_atCF512921hypothetical protein LOC100268072-7e-13At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.333e-154545Zea maysZm.4931.1.A1_atBM332329hypothetical protein LOC100273501-3e-26At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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