Gene omics information

Query gene ID	Ta.25927.1.A1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.31	42.7	Ta.25927.1.A1_x_at	CD454513	-	-	5e+0	At2g36916	unknown protein	S.X.	H.G.	Please select
0.71	88.0	TaAffx.64016.1.A1_at	BJ319071	-	-	1e+0	At2g13820	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.84583.1.S1_at	BJ313321	-	-	1e+0	At1g71780	unknown protein	S.X.	H.G.	Please select
0.46	66.8	Ta.4157.1.S1_at	BJ265659	-	-	5e+0	At5g62280	unknown protein	S.X.	H.G.	Please select
0.36	51.9	Ta.25927.1.A1_at	CD454513	-	-	5e+0	At2g36916	unknown protein	S.X.	H.G.	Please select
0.29	39.2	Ta.10587.1.A1_at	BQ166051	-	-	8e-1	At4g21620	glycine-rich protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
22.3	99.8	GSM143498	Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
21.7	99.8	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
18.8	99.7	GSM143501	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
15.5	99.6	GSM143493	Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
14.0	99.5	GSM143500	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
13.9	99.5	GSM143492	Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
13.8	99.5	GSM143490	Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
13.2	99.5	GSM143497	Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.4	99.2	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
8.3	98.8	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.97	0	1346	Ta.25927.1.A1_at	CD454513	-	-	5e+0	At2g36916	unknown protein	C.G.	S.X.	Please select
0.27	4e-53	208	Ta.27515.1.S1_at	BT009189.1	-	-	2e-3	At5g19740	peptidase M28 family protein	C.G.	S.X.	Please select
0.36	6e-37	155	TaAffx.119974.1.A1_at	BJ249556	-	-	4e+0	At5g47710	C2 domain-containing protein	C.G.	S.X.	Please select
0.04	6e-9	61	Ta.27238.1.S1_at	BT009569.1	-	-	3e-8	At5g19740	peptidase M28 family protein	C.G.	S.X.	Please select
0.02	4e-1	36	Ta.9132.3.S1_s_at	CA640252	-	-	7e-1	At5g19740	peptidase M28 family protein	C.G.	S.X.	Please select
0.02	4e-1	36	Ta.5139.1.S1_at	BT009575.1	-	-	2e-1	At5g19740	peptidase M28 family protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.4907.1.S1_at	CA728852	-	-	1e+0	At5g28295	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.116140.2.S1_at	CA593889	-	-	4e+0	At4g11870	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.3382.1.S1_at	AB042627.1	-	-	4e+0	At3g21460	electron carrier/ protein disulfide oxidoreductase	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	5e+0	32	Arabidopsis thaliana	At2g36916	6240459	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	HgAffx.15162.1.S1_at	CB281832	-	-	1e+1	At5g16140	peptidyl-tRNA hydrolase family protein	C.G.	S.X.	Please select
0.36	2e-161	567	Hordeum vulgare	Contig10185_at	Contig10185	-	-	8e-1	At3g54720	AMP1 (ALTERED MERISTEM PROGRAM 1)	C.G.	S.X.	Please select
0.33	3e-46	186	Oryza sativa	Os.36961.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.49711.1.A1_at	CV273916	hypothetical protein	-	1e-15	At5g57330	aldose 1-epimerase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	6e+0	30	Vitis vinifera	1622477_at	CF414040	hypothetical protein LOC100261452	-	4e-4	At3g22550	senescence-associated protein-related	C.G.	S.X.	Please select
0.31	7e-53	206	Zea mays	Zm.10769.1.A1_at	CF624289	glutamate carboxypeptidase 2	-	2e+0	At2g18890	protein kinase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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