Gene omics information

Query gene ID	Ta.25810.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	83.1	Ta.25810.1.A1_at	CD374040	-	-	1e+0	At5g10310	unknown protein	S.X.	H.G.	Please select
0.67	86.3	TaAffx.52385.1.S1_at	CA708316	-	-	4e+0	At1g05930	DNA binding	S.X.	H.G.	Please select
0.63	83.1	Ta.7698.3.S1_at	CA636022	-	-	2e+1	At5g60615	-	S.X.	H.G.	Please select
0.63	83.1	TaAffx.78823.1.S1_at	CA726815	-	-	4e+0	At5g26840	unknown protein	S.X.	H.G.	Please select
0.60	81.0	Ta.17218.1.S1_at	CA618872	-	-	2e+1	At5g08260	scpl35 (serine carboxypeptidase-like 35)	S.X.	H.G.	Please select
0.57	79.2	Ta.24307.1.A1_at	AL822297	cytokinin dehydrogenase	-	1e+0	At2g03570	unknown protein	S.X.	H.G.	Please select
0.44	64.5	TaAffx.52324.1.S1_at	CA709316	-	-	1e+0	At2g21220	auxin-responsive protein, putative	S.X.	H.G.	Please select
0.43	62.2	TaAffx.113686.2.S1_at	CA607016	-	-	2e+1	At3g56130	biotin/lipoyl attachment domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
103.8	100.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
30.6	99.9	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
17.8	99.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
11.7	99.3	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.2	98.8	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.3	97.6	GSM138144	Genotype RL4452 developing seed at 5 days after anthesis, biological rep1 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
5.1	97.5	GSM143522	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.4	96.8	GSM250892	TcLr1_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.1	94.5	GSM324484	Si- B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-1	36	Ta.23141.1.S1_at	BJ235767	puroindoline-a	-	2e+0	At4g29430	rps15ae (ribosomal protein S15A E)	C.G.	S.X.	Please select
0.03	1e+0	34	Ta.4144.1.S1_at	BJ259785	-	-	1e+1	At5g25940	early nodulin-related	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.3021.1.S1_a_at	CA661988	-	-	8e-4	At3g10970	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select
0.03	5e+0	32	TaAffx.6061.1.S1_at	CA692220	-	-	1e+1	At5g61440	ACHT5 (ATYPICAL CYS HIS RICH THIOREDOXIN 5)	C.G.	S.X.	Please select
0.03	5e+0	32	TaAffx.13298.1.S1_at	BG909604	-	-	3e+0	At5g01440	insulin-degrading enzyme-related	C.G.	S.X.	Please select
0.03	5e+0	32	TaAffx.110840.1.S1_at	CA653121	-	-	1e+0	At3g57440	unknown protein	C.G.	S.X.	Please select
0.03	5e+0	32	Ta.3873.1.S1_at	BQ169700	-	-	4e+0	At2g32710	KRP4	C.G.	S.X.	Please select
0.03	5e+0	32	Ta.13460.1.S1_at	BJ260665	-	-	1e+1	Atmg00810	-	C.G.	S.X.	Please select
0.01	5e+0	32	Ta.13196.1.S1_at	CK205773	-	-	4e+0	At5g10410	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At5g10310	830895	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	GmaAffx.27808.1.S1_at	BI893080	-	-	2e-1	At4g09070	-	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	Contig22222_at	Contig22222	-	-	1e+0	At5g64160	unknown protein	C.G.	S.X.	Please select
0.04	3e+0	34	Oryza sativa	Os07g0286200	NM_185307.1	-	-	8e-1	At3g63095	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+0	34	Populus trichocarpa	PtpAffx.58817.1.A1_at	CK089819	-	-	4e+0	At3g42790	AL3 (ALFIN-LIKE 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e-1	36	Vitis vinifera	1622601_at	CB977758	-	-	5e+0	At2g35736	unknown protein	C.G.	S.X.	Please select
0.03	6e-1	34	Zea mays	Zm.11908.1.A1_at	BM381698	hypothetical protein LOC100276357	-	4e+0	At5g10310	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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