CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.25662.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.0 Ta.25662.1.A1_at CD373762 - - 5e+0 At3g48840 nucleic acid binding / nucleotide binding S.X. H.G.
0.50 72.4 TaAffx.90016.1.S1_at BQ609730 - - 5e+0 At5g22380 anac090 (Arabidopsis NAC domain containing protein 90) S.X. H.G.
0.50 72.4 TaAffx.8051.1.S1_at BQ482848 - - 9e-9 At2g22370 unknown protein S.X. H.G.
0.33 46.9 Ta.19696.1.S1_at CA656618 - - 2e-1 At2g43180 catalytic S.X. H.G.
0.28 39.2 Ta.1546.1.S1_at CD906609 - - 8e-33 At3g58610 ketol-acid reductoisomerase S.X. H.G.
0.23 29.0 Ta.5798.1.S1_at CK172279 - - 4e-8 At1g79430 APL (ALTERED PHLOEM DEVELOPMENT) S.X. H.G.
0.18 21.0 Ta.2594.1.S1_s_at CD880506 - - 1e-22 At5g55160 SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.6 97.0 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
4.3 96.7 GSM111236 genotype F38b developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4 95.2 GSM298074 Crown tissue of Paragon at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
3.3 95.0 GSM138211 genotype B65 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.8 93.6 GSM138169 genotype B68 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.8 93.6 GSM138163 genotype E5 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.7 93.3 GSM138153 genotype G32 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.7 93.3 GSM138144 Genotype RL4452 developing seed at 5 days after anthesis, biological rep1 location SB GSE5937 Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
2.6 92.9 GSM138205 genotype H8 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.6 92.9 GSM111242 genotype C10 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 2e-12 73 TaAffx.92969.1.A1_at BJ238176 - - 4e+0 At3g30350 unknown protein C.G. S.X.
0.04 3e-1 36 Ta.6512.1.S1_at CK216205 - - 7e-1 At1g14060 - C.G. S.X.
0.03 1e+0 34 TaAffx.79342.1.S1_at CA717883 - - 9e-10 At5g65207 unknown protein C.G. S.X.
0.04 1e+0 34 TaAffx.36911.1.A1_at BJ308628 - - 3e-1 At2g27770 unknown protein C.G. S.X.
0.01 1e+0 34 TaAffx.122320.1.S1_at BQ620251 - - 2e-8 At1g25540 PFT1 (PHYTOCHROME AND FLOWERING TIME 1) C.G. S.X.
0.03 1e+0 34 Ta.8478.2.A1_a_at CK169696 - - 5e+0 At4g21320 HSA32 (HEAT-STRESS-ASSOCIATED 32) C.G. S.X.
0.03 1e+0 34 Ta.8478.3.S1_a_at CA687169 - - 4e+0 At4g21320 HSA32 (HEAT-STRESS-ASSOCIATED 32) C.G. S.X.
0.03 1e+0 34 Ta.8478.3.S1_x_at CA687169 - - 4e+0 At4g21320 HSA32 (HEAT-STRESS-ASSOCIATED 32) C.G. S.X.
0.03 1e+0 34 Ta.24630.3.S1_x_at CA608290 - - 1e-9 At5g65207 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At3g48840 824045 nucleic acid binding / nucleotide binding F:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;POM - - - C.G. S.X.
0.02 7e+0 32 Glycine max PsAffx.C60000058_at PsAffx.C60000058 - - 1e+0 At3g04090 SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A) C.G. S.X.
0.03 6e-1 34 Hordeum vulgare Contig8002_at Contig8002 - - 3e-7 At5g65207 unknown protein C.G. S.X.
0.06 4e-2 40 Oryza sativa Os03g0147200 9631.m00457 - - 5e-1 At4g02450 glycine-rich protein C.G. S.X.
0.04 1e-1 38 Populus trichocarpa PtpAffx.216856.1.S1_at pmrna31897 - - 2e+1 At5g43200 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 6e+0 30 Vitis vinifera 1620895_at AY427116.1 - - 5e-1 At3g05160 sugar transporter, putative C.G. S.X.
0.02 9e+0 30 Zea mays Zm.8199.1.A1_a_at BG841109 - - 5e+0 At4g30760 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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