Gene omics information

Query gene ID	Ta.25619.2.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.25619.2.S1_a_at	CA609960	-	-	1e+0	At2g14160	nucleic acid binding / nucleotide binding	S.X.	H.G.	Please select
0.61	82.0	TaAffx.129082.1.S1_x_at	CK154420	-	-	3e-6	At5g64460	-	S.X.	H.G.	Please select
0.50	72.4	Ta.3909.1.A1_x_at	BJ274929	-	-	8e-1	At3g01400	armadillo/beta-catenin repeat family protein	S.X.	H.G.	Please select
0.42	60.9	Ta.8149.1.A1_x_at	CK205375	-	-	7e-35	At4g14240	-	S.X.	H.G.	Please select
0.22	27.1	Ta.29331.2.S1_x_at	CA611511	FD-like 6 protein	-	1e+1	At5g06280	unknown protein	S.X.	H.G.	Please select
0.10	11.3	Ta.9677.1.S1_x_at	CA652973	-	-	3e+1	At5g26692	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.3	99.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.4	98.2	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
5.6	97.8	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.5	97.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0	97.4	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.9	97.3	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.4	96.8	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e-3	44	TaAffx.71051.1.S1_at	CK212093	-	-	2e-8	At1g47740	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	TaAffx.31551.2.S1_at	CD901134	-	-	3e+0	At5g10350	polyadenylate-binding protein family protein / PABP family protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.29598.1.S1_at	CA639281	-	-	3e-1	At4g21450	vesicle-associated membrane family protein / VAMP family protein	C.G.	S.X.	Please select
0.02	4e+0	32	TaAffx.3425.1.S1_at	BJ306475	-	-	2e+0	At5g47310	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.20442.3.S1_at	BJ226520	-	-	1e+0	At1g62920	-	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.9015.1.S1_s_at	CA616320	-	-	1e+0	At1g01780	LIM domain-containing protein	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.9015.1.S1_at	CA616320	-	-	1e+0	At1g01780	LIM domain-containing protein	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.12401.1.S1_at	BJ267176	-	-	4e+0	At5g52900	unknown protein	C.G.	S.X.	Please select
0.03	2e+1	30	Ta.9280.2.A1_at	AL826205	-	-	1e+0	At1g47813	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At2g14160	815902	nucleic acid binding / nucleotide binding	F:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-1	38	Glycine max	GmaAffx.47155.1.A1_at	BU550211	-	-	5e+0	At5g45170	CbbY protein-related	C.G.	S.X.	Please select
0.36	3e-132	470	Hordeum vulgare	Contig11605_at	Contig11605	-	-	4e-8	At5g47310	unknown protein	C.G.	S.X.	Please select
0.18	3e-30	133	Oryza sativa	Os03g0100900	AK103335.1	-	Eukaryotic protein of unknown function DUF862family protein	7e-4	At4g17486	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.10	4e-4	46	Populus trichocarpa	PtpAffx.25457.3.S1_a_at	CN519923	hypothetical protein	-	8e-21	At4g17486	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	1e+0	32	Vitis vinifera	1616790_at	CD798657	-	-	3e+0	At5g54590	protein kinase family protein	C.G.	S.X.	Please select
0.03	5e-1	34	Zea mays	Zm.10522.2.A1_at	BQ538089	ataxin-3	-	3e-1	At3g06610	DNA-binding enhancer protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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