Gene omics information

Query gene ID Ta.2554.3.A1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4260.9Ta.2554.3.A1_atCA726606--3e-1At3g13672seven in absentia (SINA) family proteinS.X.H.G.
0.8393.4Ta.30947.2.S1_atCA735852--1e+0At5g02530RNA and export factor-binding protein, putativeS.X.H.G.
0.5678.6Ta.22346.2.A1_atCA741140--8e-1At2g21560unknown proteinS.X.H.G.
0.5374.9Ta.8245.2.S1_x_atCA680416--4e+0At5g13570DCP2 (DECAPPING 2)S.X.H.G.
0.4869.0TaAffx.29314.1.S1_atCA645755--1e+0At5g10880tRNA synthetase-related / tRNA ligase-relatedS.X.H.G.
0.4058.4TaAffx.53813.1.S1_atCA688853--5e+0At4g23432unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.199.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription survey
15.799.6GSM298062Crown tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
13.099.4GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
12.099.4GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
11.199.3GSM298061Crown tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
9.199.0GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
8.999.0GSM298059Crown tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
7.798.7GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
7.798.7GSM298060Crown tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
7.098.5GSM298093Crown tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.244e-145513Ta.2554.1.S1_x_atCK210349--1e-46At5g26360chaperonin, putativeC.G.S.X.
0.584e-71268Ta.2554.2.S1_atCD893825--3e+0At3g61260DNA-binding family protein / remorin family proteinC.G.S.X.
0.061e-654TaAffx.105261.1.S1_atCA737104--2e-4At2g40980-C.G.S.X.
0.075e-652TaAffx.78211.1.S1_atCA735828--6e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeC.G.S.X.
0.055e-652TaAffx.77706.1.S1_atCA743807--4e+0At5g50030invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.055e-652TaAffx.77645.1.S1_atCA744660--5e-2At3g52525OFP6 (OVATE FAMILY PROTEIN 6)C.G.S.X.
0.075e-652TaAffx.50531.1.S1_atCA739081--2e+0At4g30690translation initiation factor 3 (IF-3) family proteinC.G.S.X.
0.065e-652TaAffx.50624.1.S1_atCA737700--1e-1At3g51800ATG2C.G.S.X.
0.075e-652TaAffx.50318.1.S1_atCA742779--3e+0At3g25400-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136Arabidopsis thalianaAt3g13672820573seven in absentia (SINA) family proteinF:molecular_function unknown;P:multicellular organismal development, ubiquitin-dependent protein catabolic process;C:nucleus;MPO---C.G.S.X.
0.064e-446Glycine maxGmaAffx.89678.1.A1_s_atCK606714CDNA for glutamine synthetase (3' region)-9e-2At1g65352-C.G.S.X.
0.369e-114408Hordeum vulgareContig9215_atContig9215--8e-16At5g26360chaperonin, putativeC.G.S.X.
0.032e-654Oryza sativaOs02g0247200AK102024.1-T-complex protein 1, gamma subunit (TCP-1-gamma)(CCT-gamma) (Matricin)6e-73At5g26360chaperonin, putativeC.G.S.X.
0.034e-136Populus trichocarpaPtpAffx.217651.1.S1_atpmrna33002hypothetical protein-1e+0At1g50530-C.G.S.X.
0.035e+030Vitis vinifera1618045_atCF216119hypothetical protein LOC100243133-7e-2At1g69760unknown proteinC.G.S.X.
0.051e-756Zea maysZm.16810.1.A1_atCF053948T-complex protein 1 subunit gamma-3e-32At5g26360chaperonin, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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