Gene omics information

Query gene ID	Ta.25248.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.25248.1.A1_at	CD454523	-	-	2e+0	Atmg01090	-	S.X.	H.G.	Please select
0.44	64.5	Ta.16784.1.S1_at	CA612578	-	-	4e-6	At2g23140	binding / ubiquitin-protein ligase	S.X.	H.G.	Please select
0.19	22.4	Ta.14174.1.S1_at	BG263414	-	-	3e-3	At1g49590	formin-binding protein-related	S.X.	H.G.	Please select
0.12	13.3	Ta.11736.1.A1_at	BQ170705	-	-	1e+0	At4g24950	unknown protein	S.X.	H.G.	Please select
0.05	6.7	Ta.5090.1.S1_x_at	CK168310	-	-	4e-25	At5g11980	conserved oligomeric Golgi complex component-related / COG complex component-related	S.X.	H.G.	Please select
0.04	5.8	Ta.25019.1.S1_at	BT009274.1	-	-	9e-5	At2g23350	PAB4 (POLY(A) BINDING PROTEIN 4)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.6	99.2	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.1	98.5	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.2	98.1	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.1	97.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM138145	Genotype RL4452 developing seed at 5 days after anthesis, biological rep3 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
4.0	96.3	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	TaAffx.8584.1.S1_at	CA623155	-	-	1e+1	At5g07160	DNA binding / transcription factor	C.G.	S.X.	Please select
0.02	2e+0	34	TaAffx.110945.1.S1_at	CA638048	-	-	8e+0	At1g18280	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.02	2e+0	34	Ta.5919.2.S1_at	BJ302503	-	-	2e-27	At3g62330	zinc knuckle (CCHC-type) family protein	C.G.	S.X.	Please select
0.01	2e+0	34	Ta.3403.1.S1_at	AF542974.1	Emr1	-	9e-1	At3g01740	-	C.G.	S.X.	Please select
0.02	7e+0	32	TaAffx.92327.1.S1_at	BJ270633	-	-	9e-1	At5g66815	unknown protein	C.G.	S.X.	Please select
0.02	7e+0	32	TaAffx.91595.1.S1_at	BJ305839	-	-	1e+0	At5g66590	allergen V5/Tpx-1-related family protein	C.G.	S.X.	Please select
0.02	7e+0	32	TaAffx.86610.1.S1_at	CA604523	-	-	7e-2	At1g51520	nucleic acid binding / nucleotide binding	C.G.	S.X.	Please select
0.03	7e+0	32	TaAffx.59833.1.S1_at	CA594691	-	-	9e-2	At1g19610	PDF1.4	C.G.	S.X.	Please select
0.03	7e+0	32	TaAffx.26217.1.S1_at	CA690962	-	-	9e+0	At1g47655	Dof-type zinc finger domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	34	Arabidopsis thaliana	Atmg01090	-	-	hypothetical protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e+0	34	Glycine max	GmaAffx.41618.1.S1_at	CD407254	-	-	3e-1	At1g72430	auxin-responsive protein-related	C.G.	S.X.	Please select
0.70	0	950	Hordeum vulgare	Contig16510_at	Contig16510	-	-	9e+0	At5g18540	unknown protein	C.G.	S.X.	Please select
0.21	3e-19	97	Oryza sativa	Os02g0748100	AK101365.1	-	RINT-1/TIP-1 family protein	3e-7	At3g47700	MAG2 (maigo2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	2e+0	34	Populus trichocarpa	PtpAffx.209386.1.S1_at	pmrna18591	hypothetical protein	-	1e-1	At1g54680	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e-1	36	Vitis vinifera	1616588_at	BQ792380	hypothetical protein LOC100268155	-	2e-20	At2g25870	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select
0.08	3e-3	42	Zea mays	Zm.5890.1.A1_at	AI664901	-	-	3e+0	At1g24010	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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