Gene omics information

Query gene ID	Ta.24767.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.24767.1.S1_at	CD894586	-	-	5e-5	At3g03380	DegP7 (DegP protease 7)	S.X.	H.G.	Please select
0.67	86.3	Ta.8000.1.A1_at	BQ161105	-	-	7e-1	At1g65250	protein kinase family protein	S.X.	H.G.	Please select
0.61	82.0	Ta.13406.1.S1_at	BQ606014	-	-	4e+0	At1g26530	unknown protein	S.X.	H.G.	Please select
0.57	79.2	Ta.13406.1.S1_x_at	BQ606014	-	-	4e+0	At1g26530	unknown protein	S.X.	H.G.	Please select
0.53	74.9	Ta.26089.1.A1_at	BQ237184	-	-	1e+0	At5g08480	VQ motif-containing protein	S.X.	H.G.	Please select
0.44	64.5	Ta.7229.1.S1_at	CD927748	-	-	6e-6	At1g27595	-	S.X.	H.G.	Please select
0.42	60.9	Ta.6725.1.S1_at	CK208802	-	-	3e+0	Atmg00980	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.0	99.6	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
14.7	99.5	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
12.9	99.4	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
12.2	99.4	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.6	99.3	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.1	99.3	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.2	99.2	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.6	98.9	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.5	98.9	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.7	98.7	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.52	0	928	Ta.24767.2.S1_at	CA743485	-	-	2e-2	At3g03380	DegP7 (DegP protease 7)	C.G.	S.X.	Please select
0.44	0	704	Ta.24767.3.S1_at	CA737843	-	-	4e+0	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	C.G.	S.X.	Please select
0.38	3e-142	506	TaAffx.106672.1.S1_at	CA713886	-	-	3e+0	At4g25700	BETA-OHASE 1 (BETA-HYDROXYLASE 1)	C.G.	S.X.	Please select
0.38	3e-142	506	TaAffx.106672.1.S1_x_at	CA713886	-	-	3e+0	At4g25700	BETA-OHASE 1 (BETA-HYDROXYLASE 1)	C.G.	S.X.	Please select
0.02	2e-1	38	Ta.2402.1.S1_at	CA722522	-	-	7e-12	At3g54890	LHCA1	C.G.	S.X.	Please select
0.02	2e-1	38	Ta.2402.1.S1_a_at	CA722522	-	-	7e-12	At3g54890	LHCA1	C.G.	S.X.	Please select
0.01	7e-1	36	Ta.6072.1.S1_s_at	CK168549	-	-	4e+0	At4g27320	universal stress protein (USP) family protein	C.G.	S.X.	Please select
0.02	3e+0	34	Ta.7151.2.S1_at	BJ319941	Fructan exohydrolase	-	1e+0	Atcg00150	-	C.G.	S.X.	Please select
0.02	3e+0	34	Ta.5250.3.S1_a_at	CA602002	-	-	3e-7	At4g14360	dehydration-responsive protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	5e-5	50	Arabidopsis thaliana	At3g03380	821268	DegP7 (DegP protease 7)	Encodes a putative DegP protease.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.25	5e-18	93	Glycine max	Gma.8288.1.S1_at	BU550070	-	-	6e-29	At3g03380	DegP7 (DegP protease 7)	C.G.	S.X.	Please select
0.61	0	1909	Hordeum vulgare	Contig7623_at	Contig7623	-	-	3e-14	At3g03380	DegP7 (DegP protease 7)	C.G.	S.X.	Please select
0.34	0	1104	Oryza sativa	Os02g0712000	AK065045.1	-	PDZ/DHR/GLGF domain containing protein	1e-10	At3g03380	DegP7 (DegP protease 7)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.36	3e-22	107	Populus trichocarpa	PtpAffx.34591.1.S1_s_at	CV283632	hypothetical protein	-	4e-39	At3g03380	DegP7 (DegP protease 7)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.27	3e-22	105	Vitis vinifera	1610831_at	CB976031	hypothetical protein LOC100255257	-	4e-89	At3g03380	DegP7 (DegP protease 7)	C.G.	S.X.	Please select
0.30	3e-69	262	Zea mays	ZmAffx.452.1.A1_at	AI677152	-	-	3e-6	At3g03380	DegP7 (DegP protease 7)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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