CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.24553.1.A1_at

Gene name Oxalate oxidase

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.24553.1.A1_at CA662341 Oxalate oxidase - 5e+0 At2g41445 unknown protein S.X. H.G.
0.91 98.2 Ta.5216.3.S1_x_at CA641446 - - 1e+0 At4g12490 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein S.X. H.G.
0.91 98.2 Ta.5216.1.S1_a_at CA640232 - - 2e+0 At4g12490 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein S.X. H.G.
0.91 98.2 TaAffx.107381.1.S1_at CA700789 - - 1e+0 At4g12480 pEARLI 1 S.X. H.G.
0.91 98.2 Ta.5216.1.S1_x_at CA640232 - - 2e+0 At4g12490 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein S.X. H.G.
0.77 90.8 Ta.10092.1.S1_x_at CA614315 - - 4e-1 At1g06930 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
158.7 100.0 GSM314258 tissue type: germinating seed, embryo - rep2 GSE12508 Transcription patterns during wheat development
99.0 100.0 GSM314259 tissue type: germinating seed, embryo - rep3 GSE12508 Transcription patterns during wheat development
30.6 99.9 GSM314257 tissue type: germinating seed, embryo - rep1 GSE12508 Transcription patterns during wheat development
15.9 99.6 GSM314254 tissue type: germinating seed, root - rep1 GSE12508 Transcription patterns during wheat development
12.9 99.4 GSM314256 tissue type: germinating seed, root - rep3 GSE12508 Transcription patterns during wheat development
5.3 97.6 GSM314255 tissue type: germinating seed, root - rep2 GSE12508 Transcription patterns during wheat development
4.5 96.9 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
4.1 96.4 GSM298069 Leaf tissue of Paragon at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
2.9 94.0 GSM314265 tissue type: seedling, crown - rep3 GSE12508 Transcription patterns during wheat development
2.7 93.3 GSM298081 Leaf tissue of Solstice at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.55 2e-135 482 Ta.22673.1.S1_s_at M21962.1 germin protein precursor - 1e-4 At4g14630 GLP9 (GERMIN-LIKE PROTEIN 9) C.G. S.X.
0.62 1e-102 373 Ta.27477.1.S1_at CD373670 - - 4e+0 At2g20070 - C.G. S.X.
0.62 1e-102 373 Ta.27477.1.S1_x_at CD373670 - - 4e+0 At2g20070 - C.G. S.X.
0.40 5e-77 287 Ta.24723.1.S1_x_at CA667447 - - 2e+0 At3g05950 germin-like protein, putative C.G. S.X.
0.45 2e-70 266 Ta.87.1.S1_at BE404592 - - 2e-3 At3g05950 germin-like protein, putative C.G. S.X.
0.45 2e-70 266 Ta.87.1.S1_x_at BE404592 - - 2e-3 At3g05950 germin-like protein, putative C.G. S.X.
0.47 7e-70 264 Ta.22967.1.S1_x_at CA690832 pSBGer4 protein - 5e-1 At3g10080 germin-like protein, putative C.G. S.X.
0.30 2e-64 246 Ta.27750.1.S1_at CD373503 pSBGer3 protein - 1e+1 At4g38270 GAUT3 (Galacturonosyltransferase 3) C.G. S.X.
0.31 7e-33 141 Ta.27477.3.S1_at CA610767 - - 5e-1 At4g14630 GLP9 (GERMIN-LIKE PROTEIN 9) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At2g41445 6241054 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 7e+0 32 Glycine max HgAffx.22773.1.S1_at BG310793 - - 4e+0 At2g16490 XH domain-containing protein C.G. S.X.
0.49 3e-92 337 Hordeum vulgare Contig3018_at Contig3018 - - 2e+0 At4g14630 GLP9 (GERMIN-LIKE PROTEIN 9) C.G. S.X.
0.23 1e-35 151 Oryza sativa Os03g0693700 AK103716.1 - Oxalate oxidase 1 (EC 1.2.3.4) (Germin) 8e+0 At3g10080 germin-like protein, putative C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.138572.1.A1_at DN492407 - - 5e+0 At5g56020 - C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1618165_at CD798816 - - 4e+0 At3g61678 unknown protein C.G. S.X.
0.14 2e-13 75 Zea mays Zm.503.1.A1_at CK827179 germin-like protein 2 - 1e-1 At1g77750 30S ribosomal protein S13, chloroplast, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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