Gene omics information

Query gene ID	Ta.24211.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.24211.1.A1_at	BJ253644	-	-	4e+0	At5g12880	proline-rich family protein	S.X.	H.G.	Please select
0.71	88.0	Ta.4006.1.A1_at	BJ251617	-	-	8e-2	At5g51880	iron ion binding / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	S.X.	H.G.	Please select
0.67	86.3	Ta.11917.1.A1_at	BQ171063	-	-	1e+0	At3g10890	(1-4)-beta-mannan endohydrolase, putative	S.X.	H.G.	Please select
0.67	86.3	Ta.10386.1.A1_at	BJ249523	-	-	1e-1	At1g29610	-	S.X.	H.G.	Please select
0.60	81.0	TaAffx.65316.1.A1_at	BJ251198	-	-	4e+0	At5g14602	unknown protein	S.X.	H.G.	Please select
0.59	79.8	Ta.12014.1.A1_a_at	BJ250107	-	-	3e-1	At4g33680	AGD2 (ABERRANT GROWTH AND DEATH 2)	S.X.	H.G.	Please select
0.53	74.9	TaAffx.119697.1.A1_at	BJ261932	-	-	4e+0	At4g27900	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
102.6	100.0	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
81.9	100.0	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
75.2	100.0	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
43.1	99.9	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
37.5	99.9	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
27.1	99.8	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
0.1	39.8	GSM315202	target strand labeled: Sense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
0.0	30.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
0.0	30.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
0.0	30.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-1	36	Ta.4661.1.S1_s_at	BG314545	-	-	2e-27	At5g47010	LBA1 (LOW-LEVEL BETA-AMYLASE 1)	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.4661.1.S1_at	BG314545	-	-	2e-27	At5g47010	LBA1 (LOW-LEVEL BETA-AMYLASE 1)	C.G.	S.X.	Please select
0.05	1e+0	34	TaAffx.79448.1.S1_at	CA715480	-	-	3e+0	At3g55930	RNA splicing factor-related	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.93935.1.A1_at	BG910058	-	-	8e-1	At3g62730	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.84707.1.S1_at	CA630794	-	-	2e+1	At5g48175	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.81291.1.S1_at	CA687749	-	-	1e+1	At5g24890	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.80543.1.S1_at	CA695528	-	-	4e+0	At5g27980	seed maturation family protein	C.G.	S.X.	Please select
0.02	4e+0	32	TaAffx.105432.1.S1_s_at	CA727810	-	-	2e-3	At2g47890	zinc finger (B-box type) family protein	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.8196.2.S1_at	CK211943	-	-	1e+0	At5g27440	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At5g12880	831128	proline-rich family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-1	36	Glycine max	PsAffx.C45000067_at	PsAffx.C45000067	-	-	2e+1	At4g21850	methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein	C.G.	S.X.	Please select
0.04	8e+0	30	Hordeum vulgare	HZ40L07r_at	HZ40L07r	-	-	2e+0	At1g54840	-	C.G.	S.X.	Please select
0.04	2e+0	34	Oryza sativa	OsAffx.16105.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e+0	32	Populus trichocarpa	PtpAffx.224088.1.S1_s_at	pmrna42325	hypothetical protein	-	3e-1	At1g10747	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	8e-2	36	Vitis vinifera	1612913_at	BQ792733	similar to Citrate synthase, glyoxysomal	-	1e-46	At3g58750	CSY2 (citrate synthase 2)	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	Zm.17724.3.S1_a_at	CK370253	-	-	2e-1	At1g04985	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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