Gene omics information

Query gene ID	Ta.24202.1.S1_s_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.0	Ta.24202.1.S1_s_at	CA693707	-	-	7e+0	At4g33640	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.6101.1.S1_at	CD937323	-	-	2e-10	At3g48890	ATMP2	S.X.	H.G.	Please select
0.50	72.4	Ta.28730.1.S1_at	BJ261271	-	-	2e-7	At3g63310	glutamate binding	S.X.	H.G.	Please select
0.40	58.4	Ta.22715.2.A1_at	CD873981	-	-	3e-12	At2g20840	secretory carrier membrane protein (SCAMP) family protein	S.X.	H.G.	Please select
0.33	46.9	Ta.6113.1.S1_a_at	CA668966	-	-	3e+0	At5g22300	NIT4 (NITRILASE 4)	S.X.	H.G.	Please select
0.33	46.9	Ta.20778.3.A1_at	CA710788	-	-	2e-1	At5g62040	brother of FT and TFL1 protein (BFT)	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.6	97.0	GSM143502	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.8	96.0	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.7	95.8	GSM143504	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.6	95.6	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.5	95.4	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.3	95.0	GSM143503	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.3	95.0	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.3	95.0	GSM143515	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.2	94.8	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.34	3e-85	313	Ta.6101.1.S1_at	CD937323	-	-	2e-10	At3g48890	ATMP2	C.G.	S.X.	Please select
0.04	5e-1	34	Ta.9047.2.S1_a_at	BJ212533	-	-	4e+0	At5g22070	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.12279.2.S1_at	CA656066	-	-	4e+0	At5g62910	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.12279.3.S1_at	CA729776	-	-	1e+0	At4g12460	ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.105889.1.S1_s_at	CA728431	-	-	1e+0	At3g61260	DNA-binding family protein / remorin family protein	C.G.	S.X.	Please select
0.05	8e+0	30	TaAffx.90213.1.S1_at	BQ606654	-	-	3e+0	At5g48270	unknown protein	C.G.	S.X.	Please select
0.04	8e+0	30	TaAffx.87257.1.S1_at	CA593288	-	-	4e+0	At5g04800	40S ribosomal protein S17 (RPS17D)	C.G.	S.X.	Please select
0.02	8e+0	30	Ta.8878.1.S1_at	AJ615214	-	-	2e+0	At5g28295	unknown protein	C.G.	S.X.	Please select
0.04	8e+0	30	Ta.5305.1.A1_at	BJ285452	-	-	1e+0	At4g09260	unknown protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	7e+0	30	Arabidopsis thaliana	At4g33640	829505	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	3e+0	32	Glycine max	GmaAffx.56441.1.S1_at	BF068648	-	-	2e+0	At2g22345	-	C.G.	S.X.	Please select
0.33	2e-23	107	Hordeum vulgare	HVSMEg0015I15r2_at	HVSMEg0015I15r2	-	-	1e-6	At3g48890	ATMP2	C.G.	S.X.	Please select
0.02	4e+0	32	Oryza sativa	Os03g0170300	AK067530.1	-	3-Dehydroquinate synthase family protein	3e-3	At3g28760	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e+0	32	Populus trichocarpa	Ptp.7864.1.S1_at	CX654512	hypothetical protein	-	7e-27	At1g16740	ribosomal protein L20 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	8e+0	28	Vitis vinifera	1617177_at	CD802155	-	-	3e+0	At3g25905	CLE27 (CLAVATA3/ESR-RELATED 27)	C.G.	S.X.	Please select
0.04	2e-1	34	Zea mays	Zm.8367.1.A1_at	BM073854	-	-	5e+0	At3g57810	OTU-like cysteine protease family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage