Gene omics information

Query gene ID Ta.2402.1.S1_a_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2Ta.2402.1.S1_a_atCA722522--7e-12At3g54890LHCA1S.X.H.G.
0.6081.0Ta.2392.1.S1_x_atCA623973--2e+0At3g07450protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.5374.9TaAffx.98182.1.S1_atCA600843--1e+1At2g02280AtPP2-B4 (Phloem protein 2-B4)S.X.H.G.
0.5072.4Ta.20639.2.A1_a_atBQ620062--3e-7At3g47470LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4)S.X.H.G.
0.4666.8Ta.3581.3.S1_x_atCA598998--4e-7At1g31330PSAF (photosystem I subunit F)S.X.H.G.
0.4666.8Ta.581.1.S1_atAY123417.1hypothetical LOC543355-1e-7At1g32470glycine cleavage system H protein, mitochondrial, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.997.3GSM298054Leaf tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
4.396.7GSM314266tissue type: seedling, leaf - rep1GSE12508Transcription patterns during wheat development
4.396.7GSM314267tissue type: seedling, leaf - rep2GSE12508Transcription patterns during wheat development
4.396.7GSM298066Leaf tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
3.996.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
3.996.1GSM298053Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
3.996.1GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
3.896.0GSM314268tissue type: seedling, leaf - rep3GSE12508Transcription patterns during wheat development
3.795.8GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.795.8GSM298068Leaf tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9301481Ta.2402.1.S1_atCA722522--7e-12At3g54890LHCA1C.G.S.X.
0.530646Ta.2402.3.S1_x_atCK216367--5e-22At3g54890LHCA1C.G.S.X.
0.552e-77289Ta.12572.1.A1_x_atBQ243633--1e-2At3g54890LHCA1C.G.S.X.
0.552e-77289Ta.12572.1.A1_atBQ243633--1e-2At3g54890LHCA1C.G.S.X.
0.042e-654Ta.22403.2.A1_atCA742965--3e+0At5g55610unknown proteinC.G.S.X.
0.052e-654Ta.13213.2.S1_atCA734889--4e+0At1g71730unknown proteinC.G.S.X.
0.052e-654Ta.13213.2.S1_x_atCA734889--4e+0At1g71730unknown proteinC.G.S.X.
0.043e-550TaAffx.4349.2.S1_atCA744198--1e+1At5g28610-C.G.S.X.
0.043e-550TaAffx.4349.2.S1_s_atCA744198--1e+1At5g28610-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.157e-1271Arabidopsis thalianaAt3g54890824654LHCA1Encodes a component of the light harvesting complex associated with photosystem I.---C.G.S.X.
0.041e-138Glycine maxGmaAffx.69688.6.S1_s_atCA935054--2e-24At3g47470LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4)C.G.S.X.
0.591e-135482Hordeum vulgareHV14N20u_x_atHV14N20u--1e-8At3g54890LHCA1C.G.S.X.
0.124e-49196Oryza sativaOs01g0124000AK060800.1-Bowman Birk trypsin inhibitor4e-9At3g54890LHCA1C.G.S.X.
0.054e-550Populus trichocarpaPtp.5232.1.S1_atCF936634light-harvesting complex I protein Lhca1-4e-48At3g54890LHCA1C.G.S.X.
0.102e-961Vitis vinifera1619903_atCD720479hypothetical protein LOC100263275-8e-71At3g54890LHCA1C.G.S.X.
0.186e-63240Zea maysZm.14486.1.A1_atAI964508chlorophyll a-b binding protein 6A-6e-7At3g54890LHCA1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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